STRINGSTRING
dnaA dnaA recF recF Sare_0035 Sare_0035 clpB clpB Sare_0137 Sare_0137 purA purA Sare_0180 Sare_0180 Sare_0222 Sare_0222 Sare_0252 Sare_0252 Sare_0258 Sare_0258 Sare_0259 Sare_0259 recD2 recD2 Sare_0293 Sare_0293 Sare_0296 Sare_0296 Sare_0323 Sare_0323 pstB pstB Sare_0348 Sare_0348 Sare_0411 Sare_0411 Sare_0434 Sare_0434 Sare_0447 Sare_0447 Sare_0450 Sare_0450 Sare_0520 Sare_0520 purA-2 purA-2 Sare_0621 Sare_0621 Sare_0662 Sare_0662 Sare_0705 Sare_0705 Sare_0728 Sare_0728 Sare_0738 Sare_0738 Sare_0752 Sare_0752 Sare_0763 Sare_0763 Sare_0766 Sare_0766 Sare_0767 Sare_0767 Sare_0785 Sare_0785 Sare_0786 Sare_0786 mfd mfd Sare_0845 Sare_0845 secA secA ftsE ftsE Sare_0939 Sare_0939 Sare_0946 Sare_0946 Sare_1009 Sare_1009 Sare_1025 Sare_1025 Sare_1029 Sare_1029 Sare_1093 Sare_1093 Sare_1135 Sare_1135 Sare_1169 Sare_1169 smc smc ftsY ftsY ffh ffh Sare_1215 Sare_1215 Sare_1292 Sare_1292 infB infB Sare_1351 Sare_1351 Sare_1365 Sare_1365 recA recA Sare_1395 Sare_1395 miaA miaA hflX hflX Sare_1429 Sare_1429 Sare_1438 Sare_1438 Sare_1496 Sare_1496 Sare_1498 Sare_1498 bioD bioD Sare_1552 Sare_1552 Sare_1568 Sare_1568 Sare_1601 Sare_1601 Sare_1622 Sare_1622 Sare_1626 Sare_1626 Sare_1638 Sare_1638 Sare_1639 Sare_1639 Sare_1664 Sare_1664 Sare_1665 Sare_1665 Sare_1680 Sare_1680 Sare_1709 Sare_1709 Sare_1716 Sare_1716 Sare_1720 Sare_1720 Sare_1727 Sare_1727 Sare_1772 Sare_1772 Sare_1781 Sare_1781 Sare_1791 Sare_1791 Sare_1792 Sare_1792 ruvB ruvB Sare_1815 Sare_1815 Sare_1825 Sare_1825 Sare_1828 Sare_1828 aroK aroK Sare_1854 Sare_1854 priA priA Sare_1859 Sare_1859 Sare_1904 Sare_1904 pyrG pyrG Sare_1916 Sare_1916 cmk cmk der der Sare_1929 Sare_1929 Sare_1939 Sare_1939 tmk tmk Sare_1971 Sare_1971 Sare_2042 Sare_2042 Sare_2076 Sare_2076 Sare_2192 Sare_2192 Sare_2197 Sare_2197 lon lon Sare_2250 Sare_2250 secA-2 secA-2 Sare_2304 Sare_2304 Sare_2308 Sare_2308 Sare_2351 Sare_2351 arc arc Sare_2374 Sare_2374 Sare_2401 Sare_2401 Sare_2447 Sare_2447 Sare_2467 Sare_2467 Sare_2478 Sare_2478 Sare_2486 Sare_2486 Sare_2551 Sare_2551 Sare_2572 Sare_2572 Sare_2581 Sare_2581 Sare_2585 Sare_2585 Sare_2592 Sare_2592 Sare_2614 Sare_2614 Sare_2618 Sare_2618 Sare_2630 Sare_2630 Sare_2650 Sare_2650 cobB cobB Sare_2708 Sare_2708 Sare_2709 Sare_2709 Sare_2719 Sare_2719 Sare_2734 Sare_2734 Sare_2744 Sare_2744 Sare_2782 Sare_2782 Sare_2790 Sare_2790 Sare_2832 Sare_2832 Sare_2871 Sare_2871 Sare_2902 Sare_2902 Sare_2927 Sare_2927 Sare_2931 Sare_2931 Sare_2940 Sare_2940 Sare_2953 Sare_2953 Sare_2980 Sare_2980 Sare_2987 Sare_2987 Sare_3085 Sare_3085 Sare_3086 Sare_3086 Sare_3088 Sare_3088 Sare_3092 Sare_3092 Sare_3099 Sare_3099 Sare_3112 Sare_3112 Sare_3159 Sare_3159 Sare_3169 Sare_3169 Sare_3172 Sare_3172 Sare_3225 Sare_3225 Sare_3254 Sare_3254 Sare_3298 Sare_3298 Sare_3301 Sare_3301 Sare_3307 Sare_3307 Sare_3328 Sare_3328 Sare_3336 Sare_3336 uvrA uvrA rsgA rsgA Sare_3360 Sare_3360 uvrB uvrB coaE coaE Sare_3373 Sare_3373 Sare_3374 Sare_3374 Sare_3387 Sare_3387 Sare_3402 Sare_3402 Sare_3406 Sare_3406 Sare_3407 Sare_3407 Sare_3425 Sare_3425 Sare_3458 Sare_3458 Sare_3468 Sare_3468 Sare_3486 Sare_3486 Sare_3545 Sare_3545 Sare_3603 Sare_3603 Sare_3630 Sare_3630 Sare_3636 Sare_3636 Sare_3671 Sare_3671 Sare_3718 Sare_3718 Sare_3729 Sare_3729 Sare_3800 Sare_3800 Sare_3815 Sare_3815 Sare_3822 Sare_3822 era era Sare_3832 Sare_3832 lepA lepA Sare_3846 Sare_3846 obg obg clpX clpX Sare_3917 Sare_3917 Sare_3927 Sare_3927 cobQ cobQ tmk-2 tmk-2 Sare_3977 Sare_3977 Sare_3990 Sare_3990 Sare_4004 Sare_4004 atpD atpD atpA atpA rho rho Sare_4068 Sare_4068 Sare_4072 Sare_4072 rsgA-2 rsgA-2 Sare_4120 Sare_4120 Sare_4130 Sare_4130 Sare_4131 Sare_4131 Sare_4137 Sare_4137 ychF ychF Sare_4165 Sare_4165 Sare_4166 Sare_4166 Sare_4168 Sare_4168 Sare_4170 Sare_4170 Sare_4172 Sare_4172 Sare_4179 Sare_4179 Sare_4180 Sare_4180 Sare_4186 Sare_4186 Sare_4191 Sare_4191 Sare_4207 Sare_4207 Sare_4209 Sare_4209 Sare_4210 Sare_4210 Sare_4237 Sare_4237 Sare_4245 Sare_4245 Sare_4263 Sare_4263 Sare_4270 Sare_4270 Sare_4282 Sare_4282 adk adk tuf tuf fusA fusA Sare_4341 Sare_4341 Sare_4403 Sare_4403 tmk-3 tmk-3 Sare_4414 Sare_4414 Sare_4421 Sare_4421 Sare_4422 Sare_4422 Sare_4478 Sare_4478 Sare_4482 Sare_4482 Sare_4499 Sare_4499 Sare_4508 Sare_4508 Sare_4550 Sare_4550 Sare_4552 Sare_4552 Sare_4559 Sare_4559 Sare_4598 Sare_4598 Sare_4606 Sare_4606 Sare_4634 Sare_4634 Sare_4657 Sare_4657 radA radA Sare_4709 Sare_4709 Sare_4726 Sare_4726 Sare_4735 Sare_4735 Sare_4741 Sare_4741 ftsH ftsH Sare_4753 Sare_4753 Sare_4781 Sare_4781 Sare_4787 Sare_4787 Sare_4793 Sare_4793 Sare_4794 Sare_4794 Sare_4837 Sare_4837 Sare_4841 Sare_4841 Sare_4843 Sare_4843 Sare_4854 Sare_4854 Sare_4875 Sare_4875 Sare_4885 Sare_4885 Sare_4898 Sare_4898 Sare_4935 Sare_4935 Sare_4937 Sare_4937 Sare_4970 Sare_4970 Sare_4971 Sare_4971 Sare_5012 Sare_5012 Sare_5049 Sare_5049 Sare_5052 Sare_5052 Sare_5064 Sare_5064 Sare_5105 Sare_5105
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
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gene neighborhood
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dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (591 aa)
recFDNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (376 aa)
Sare_0035Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: stp:Strop_0029 helix-turn-helix domain protein. (853 aa)
clpBATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (863 aa)
Sare_0137KEGG: stp:Strop_0132 ATPase involved in chromosome partitioning-like protein. (586 aa)
purAAdenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (429 aa)
Sare_0180Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: sma:SAV247 hypothetical protein. (800 aa)
Sare_0222PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ace:Acel_1451 ABC transporter related. (247 aa)
Sare_0252KEGG: stp:Strop_0213 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase. (834 aa)
Sare_0258KEGG: stp:Strop_0219 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (369 aa)
Sare_0259KEGG: stp:Strop_0220 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (371 aa)
recD2Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (742 aa)
Sare_0293KEGG: stp:Strop_0254 microtubule-severing ATPase; PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Belongs to the AAA ATPase family. (748 aa)
Sare_0296PFAM: peptidase S15; ABC transporter related; X-Pro dipeptidyl-peptidase domain protein; SMART: AAA ATPase; KEGG: stp:Strop_0256 ABC transporter related. (949 aa)
Sare_0323SMART: helicase c2; KEGG: stp:Strop_0280 helicase C2. (699 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (306 aa)
Sare_0348PFAM: regulatory protein LuxR; KEGG: sma:SAV2729 LuxR-family transcriptional regulator. (975 aa)
Sare_0411PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_1869 ABC transporter-related protein. (287 aa)
Sare_0434PFAM: Tetratricopeptide TPR_4; KEGG: stp:Strop_0364 adenylate cyclase family 3-like protein. (907 aa)
Sare_0447KEGG: stp:Strop_0376 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases. (708 aa)
Sare_0450PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_0379 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. (548 aa)
Sare_0520PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0432 ABC transporter related. (249 aa)
purA-2Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (422 aa)
Sare_0621PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV529 putative ABC transporter ATP-binding protein. (246 aa)
Sare_0662Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (382 aa)
Sare_0705PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0763 ABC transporter related. (505 aa)
Sare_0728PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0784 ABC transporter related. (598 aa)
Sare_0738Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (435 aa)
Sare_0752PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0808 ABC transporter related. (551 aa)
Sare_0763PFAM: protein of unknown function ATP binding; KEGG: stp:Strop_0819 protein of unknown function, ATP binding. (196 aa)
Sare_0766KEGG: stp:Strop_0822 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase. (611 aa)
Sare_0767KEGG: stp:Strop_0823 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase. (559 aa)
Sare_0785PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0842 ABC transporter, transmembrane region. (701 aa)
Sare_0786PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0843 ABC transporter related. (577 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1218 aa)
Sare_0845PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_0902 ATPase associated with various cellular activities, AAA_3. (335 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (971 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (226 aa)
Sare_0939PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: stp:Strop_1438 cell divisionFtsK/SpoIIIE. (1312 aa)
Sare_0946PFAM: cell divisionFtsK/SpoIIIE; KEGG: stp:Strop_0997 cell divisionFtsK/SpoIIIE. (895 aa)
Sare_1009Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (253 aa)
Sare_1025PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_1029KEGG: sen:SACE_3390 hypothetical protein. (188 aa)
Sare_1093PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_1201 ABC transporter related. (303 aa)
Sare_1135PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_1245 ATPase associated with various cellular activities, AAA_3. (369 aa)
Sare_1169PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_1279 DEAD/DEAH box helicase domain protein. (733 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1198 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (395 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (514 aa)
Sare_1215PFAM: cell divisionFtsK/SpoIIIE; KEGG: fra:Francci3_0138 cell divisionFtsK/SpoIIIE. (455 aa)
Sare_1292PFAM: protein of unknown function ATP binding; KEGG: stp:Strop_3596 protein of unknown function, ATP binding. (203 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (995 aa)
Sare_1351PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: stp:Strop_1393 cell divisionFtsK/SpoIIIE. (817 aa)
Sare_1365PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_1406 DEAD/H associated domain protein. (1561 aa)
recArecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (348 aa)
Sare_1395PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_1431 ABC transporter related. (251 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (342 aa)
hflXSmall GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (515 aa)
Sare_1429PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fra:Francci3_1590 ABC transporter related; Belongs to the ABC transporter superfamily. (350 aa)
Sare_1438PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: stp:Strop_1473 type III restriction enzyme, res subunit. (575 aa)
Sare_1496PFAM: SMC domain protein; KEGG: stp:Strop_1551 SMC domain protein. (824 aa)
Sare_1498KEGG: stp:Strop_1553 hypothetical protein. (582 aa)
bioDDethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (234 aa)
Sare_1552KEGG: stp:Strop_1592 hypothetical protein. (754 aa)
Sare_1568KEGG: sen:SACE_6000 cell division FtsK/SpoIIIE. (433 aa)
Sare_1601PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0397 ABC transporter related. (299 aa)
Sare_1622KEGG: stp:Strop_1635 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase. (398 aa)
Sare_1626KEGG: stp:Strop_1641 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (362 aa)
Sare_1638PFAM: GTP-binding protein HSR1-related; KEGG: stp:Strop_1653 GTP-binding protein, HSR1-related. (501 aa)
Sare_1639PFAM: Dynamin family protein; GTP-binding protein HSR1-related; KEGG: stp:Strop_1654 dynamin family protein. (605 aa)
Sare_1664KEGG: stp:Strop_1672 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (329 aa)
Sare_1665KEGG: stp:Strop_1673 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (336 aa)
Sare_1680PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_1685 ABC transporter related. (272 aa)
Sare_1709KEGG: stp:Strop_1712 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases. (1339 aa)
Sare_1716PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_1732 DEAD/DEAH box helicase domain protein. (836 aa)
Sare_1720PFAM: sulfotransferase; KEGG: stp:Strop_1735 sulfotransferase. (289 aa)
Sare_1727KEGG: stp:Strop_1744 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases. (856 aa)
Sare_1772TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: stp:Strop_1785 small GTP-binding protein. (717 aa)
Sare_1781PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_1795 ABC transporter related. (297 aa)
Sare_1791PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_1801 ABC transporter related. (253 aa)
Sare_1792PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_1802 ABC transporter related. (230 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (354 aa)
Sare_1815PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: stp:Strop_1824 AAA ATPase, central domain protein. (502 aa)
Sare_1825PFAM: lipopolysaccharide biosynthesis protein; KEGG: stp:Strop_1834 lipopolysaccharide biosynthesis protein. (556 aa)
Sare_1828PFAM: sulfotransferase; KEGG: stp:Strop_1837 sulfotransferase. (300 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (167 aa)
Sare_1854SMART: guanylate kinase/L-type calcium channel region; KEGG: stp:Strop_1861 guanylate kinase/L-type calcium channel region. (177 aa)
priAConserved hypothetical protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (625 aa)
Sare_1859KEGG: stp:Strop_1866 hypothetical protein. (327 aa)
Sare_1904DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (585 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (581 aa)
Sare_1916PFAM: Cobyrinic acid ac-diamide synthase; KEGG: stp:Strop_1925 cobyrinic acid a,c-diamide synthase. (307 aa)
cmkKEGG: stp:Strop_1929 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. (226 aa)
derSmall GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (467 aa)
Sare_1929PFAM: cell divisionFtsK/SpoIIIE; KEGG: sen:SACE_7023 hypothetical protein. (737 aa)
Sare_1939PFAM: NERD domain protein; KEGG: fal:FRAAL5342 hypothetical protein; putative DNA helicase II homolog. (700 aa)
tmkdTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (227 aa)
Sare_1971TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: sma:SAV7543 putative helicase. (929 aa)
Sare_2042KEGG: sco:SCO3824 putative ABC-transporter ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (328 aa)
Sare_2076PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2650 ABC transporter related. (514 aa)
Sare_2192PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4275 ATPase AAA-2 domain protein; Belongs to the ClpA/ClpB family. (836 aa)
Sare_2197Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: stp:Strop_2058 transcriptional activator domain. (630 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (778 aa)
Sare_2250PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_2106 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. (574 aa)
secA-2SecA DEAD domain protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (763 aa)
Sare_2304PFAM: cell divisionFtsK/SpoIIIE; KEGG: stp:Strop_2152 cell divisionFtsK/SpoIIIE. (890 aa)
Sare_2308PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2156 ATPase AAA-2 domain protein; Belongs to the ClpA/ClpB family. (848 aa)
Sare_2351PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2234 ABC transporter related. (255 aa)
arcAAA ATPase central domain protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (593 aa)
Sare_2374PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DSH domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_2256 DSH domain protein. (922 aa)
Sare_2401PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_0297 ABC transporter related. (252 aa)
Sare_2447PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_4615 putative ATP-binding component of an ABC transport protein. (647 aa)
Sare_2467KEGG: stp:Strop_1146 hypothetical protein. (189 aa)
Sare_2478PFAM: ABC transporter related; KEGG: stp:Strop_2335 ABC transporter related. (797 aa)
Sare_2486PFAM: thymidine kinase; KEGG: stp:Strop_2343 thymidine kinase. (234 aa)
Sare_2551PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2402 ABC transporter related. (347 aa)
Sare_2572KEGG: tfu:Tfu_1601 CRISPR-associated helicase Cas3, core; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases. (986 aa)
Sare_2581PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_2585PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2430 ABC transporter related. (308 aa)
Sare_2592Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: stp:Strop_2437 transcriptional activator domain. (602 aa)
Sare_2614PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: stp:Strop_3014 cobalamin synthesis protein, P47K. (410 aa)
Sare_2618PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2035 ABC transporter related. (247 aa)
Sare_2630PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2005 ABC transporter related; Belongs to the ABC transporter superfamily. (378 aa)
Sare_2650PFAM: Tetratricopeptide TPR_4; KEGG: sma:SAV5712 ATP/GTP-binding protein. (1311 aa)
cobBCobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (452 aa)
Sare_2708TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: stp:Strop_2526 cob(I)alamin adenosyltransferase. (203 aa)
Sare_2709KEGG: stp:Strop_2527 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (730 aa)
Sare_2719PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2540 ABC transporter related. (308 aa)
Sare_2734PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2547 ABC transporter related. (354 aa)
Sare_2744PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2555 ABC transporter related. (269 aa)
Sare_2782PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2585 ABC transporter related. (302 aa)
Sare_2790Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (305 aa)
Sare_2832KEGG: stp:Strop_2635 hypothetical protein. (374 aa)
Sare_2871PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: fal:FRAAL2455 hypothetical protein. (1203 aa)
Sare_2902PFAM: cobalamin synthesis CobW domain protein; KEGG: stp:Strop_4195 cobalamin synthesis CobW domain protein. (427 aa)
Sare_2927PFAM: ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_2019 ATPase associated with various cellular activities, AAA_5. (370 aa)
Sare_2931ATPase-like protein; KEGG: fal:FRAAL4738 putative LuxR-family transcriptional regulator. (1051 aa)
Sare_2940KEGG: sco:SCO3824 putative ABC-transporter ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (335 aa)
Sare_2953KEGG: acr:Acry_2451 hypothetical protein. (376 aa)
Sare_2980KEGG: sen:SACE_1035 phosphoribulokinase / uridine kinase family. (250 aa)
Sare_2987PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2015 ABC transporter related. (555 aa)
Sare_3085KEGG: pac:PPA1616 UvrD/Rep helicase. (717 aa)
Sare_3086Helicase superfamily 1 and 2 ATP-binding; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: pac:PPA1615 DeaD/DeaH box helicase. (2125 aa)
Sare_3088PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: pac:PPA1577 putative helicase. (956 aa)
Sare_3092KEGG: fal:FRAAL0246 hypothetical protein; putative helicase. (941 aa)
Sare_3099Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; NB-ARC domain protein; transcriptional activator domain; KEGG: sco:SCO4426 regulatory protein. (654 aa)
Sare_3112PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_2912 ATPase associated with various cellular activities, AAA_3. (331 aa)
Sare_3159Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: sco:SCO6280 regulatory protein. (968 aa)
Sare_3169PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0636 ABC transporter ATP-binding protein. (541 aa)
Sare_3172KEGG: stp:Strop_2948 hypothetical protein. (194 aa)
Sare_3225PFAM: protein of unknown function ATP binding; KEGG: tfu:Tfu_0943 putative ATP/GTP-binding protein. (201 aa)
Sare_3254PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_3028 ATPase associated with various cellular activities, AAA_3. (371 aa)
Sare_3298PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3071 ABC transporter related. (658 aa)
Sare_3301PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3074 ABC transporter related. (534 aa)
Sare_3307KEGG: stp:Strop_3080 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)
Sare_3328Conserved hypothetical protein; Displays ATPase and GTPase activities. (295 aa)
Sare_3336KEGG: stp:Strop_3105 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. (616 aa)
uvrAExcinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (987 aa)
rsgARibosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (362 aa)
Sare_3360TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: stp:Strop_3132 GTP-binding protein TypA. (622 aa)
uvrBExcinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (700 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (392 aa)
Sare_3373PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3146 ABC transporter related. (236 aa)
Sare_3374PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3147 ABC transporter related. (302 aa)
Sare_3387PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3162 ABC transporter related. (324 aa)
Sare_3402PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3177 ABC transporter related. (245 aa)
Sare_3406PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3180 ABC transporter related. (593 aa)
Sare_3407PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3181 ABC transporter related. (625 aa)
Sare_3425KEGG: stp:Strop_3199 hypothetical protein. (474 aa)
Sare_3458PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_3232 ATPase associated with various cellular activities, AAA_3. (350 aa)
Sare_3468KEGG: stp:Strop_3241 hypothetical protein. (260 aa)
Sare_3486KEGG: pac:PPA1477 putative glycine betaine/proline ABC transporter; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase. (443 aa)
Sare_3545Cobalbumin biosynthesis protein; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; cobalbumin biosynthesis protein; KEGG: stp:Strop_3313 cobalbumin biosynthesis protein. (665 aa)
Sare_3603KEGG: stp:Strop_3363 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases. (1074 aa)
Sare_3630KEGG: stp:Strop_3388 hypothetical protein. (705 aa)
Sare_3636ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: regulatory protein LuxR; KEGG: stp:Strop_3393 regulatory protein, LuxR. (953 aa)
Sare_3671Transcriptional regulator, SARP family; PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sen:SACE_0488 transcriptional regulator, SARP family. (1048 aa)
Sare_3718KEGG: lxx:Lxx24020 phage-related terminase. (495 aa)
Sare_3729TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: sco:SCP1.196 putative dna primase/helicase. (874 aa)
Sare_3800PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3423 ABC transporter related. (310 aa)
Sare_3815PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3438 ABC transporter related. (253 aa)
Sare_3822PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3443 ABC transporter related. (475 aa)
eraGTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (300 aa)
Sare_3832PFAM: PhoH family protein; KEGG: stp:Strop_3453 PhoH family protein. (329 aa)
lepAGTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (640 aa)
Sare_3846TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: stp:Strop_3467 DNA polymerase III, delta subunit. (326 aa)
obgGTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (481 aa)
clpXATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (429 aa)
Sare_3917PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3542 ABC transporter related. (558 aa)
Sare_3927KEGG: stp:Strop_3552 hypothetical protein. (340 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (575 aa)
tmk-2Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (237 aa)
Sare_3977PFAM: protein of unknown function ATP binding; KEGG: stp:Strop_3596 protein of unknown function, ATP binding. (200 aa)
Sare_3990KEGG: stp:Strop_3609 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase. (329 aa)
Sare_4004PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3622 ABC transporter related. (282 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (485 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (550 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (688 aa)
Sare_4068PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3688 ABC transporter related. (311 aa)
Sare_4072Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (689 aa)
rsgA-2GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (334 aa)
Sare_4120PFAM: UvrD/REP helicase; HRDC domain protein; KEGG: stp:Strop_3739 UvrD/REP helicase. (719 aa)
Sare_4130PFAM: UvrD/REP helicase; KEGG: stp:Strop_3748 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1162 aa)
Sare_4131PFAM: UvrD/REP helicase; KEGG: stp:Strop_3749 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1096 aa)
Sare_4137KEGG: stp:Strop_3755 hypothetical protein. (215 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (361 aa)
Sare_4165PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3785 ABC transporter related. (607 aa)
Sare_4166PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3786 ABC transporter related. (633 aa)
Sare_4168PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3788 ABC transporter related. (318 aa)
Sare_4170PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3790 ABC transporter related. (304 aa)
Sare_4172PFAM: adenylylsulfate kinase; KEGG: stp:Strop_3792 adenylylsulfate kinase. (508 aa)
Sare_4179KEGG: stp:Strop_3799 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (364 aa)
Sare_4180KEGG: stp:Strop_3800 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (346 aa)
Sare_4186PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_0530 ABC transporter related. (611 aa)
Sare_4191Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; SMART: AAA ATPase; KEGG: sma:SAV3804 transcriptional regulator. (621 aa)
Sare_4207TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: stp:Strop_3817 ATP-dependent DNA helicase PcrA. (794 aa)
Sare_4209KEGG: stp:Strop_3819 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (336 aa)
Sare_4210KEGG: stp:Strop_3820 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (345 aa)
Sare_4237PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3847 ABC transporter related. (271 aa)
Sare_4245PFAM: protein of unknown function UPF0079; KEGG: stp:Strop_3855 protein of unknown function UPF0079. (164 aa)
Sare_4263PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: stp:Strop_3872 protein of unknown function, ATP binding. (205 aa)
Sare_4270PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3879 ABC transporter related. (257 aa)
Sare_4282PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3891 ABC transporter related. (559 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (217 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (397 aa)
fusATranslation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (698 aa)
Sare_4341PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_3950 helicase domain protein. (559 aa)
Sare_4403KEGG: stp:Strop_4022 DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: AAA ATPase. (424 aa)
tmk-3dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (703 aa)
Sare_4414PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: stp:Strop_4033 DEAD/DEAH box helicase domain protein. (824 aa)
Sare_4421PFAM: type II secretion system protein E; KEGG: stp:Strop_4039 type II secretion system protein E. (401 aa)
Sare_4422KEGG: stp:Strop_4040 hypothetical protein. (366 aa)
Sare_4478TIGRFAM: CRISPR-associated helicase Cas3, Anaes-subtype; PFAM: helicase domain protein; KEGG: dps:DP0186 hypothetical protein. (967 aa)
Sare_4482KEGG: stp:Strop_4077 hypothetical protein. (680 aa)
Sare_4499PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4079 ABC transporter related. (271 aa)
Sare_4508PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_4088 DEAD/DEAH box helicase domain protein. (469 aa)
Sare_4550KEGG: sen:SACE_0424 probable ABC transporter, ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (314 aa)
Sare_4552Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; KEGG: sen:SACE_0421 putative transcriptional regulator. (1043 aa)
Sare_4559PFAM: regulatory protein LuxR; KEGG: sma:SAV2901 LuxR-family transcriptional regulator. (877 aa)
Sare_4598PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4172 ABC transporter related. (494 aa)
Sare_4606Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; KEGG: stp:Strop_0492 transcriptional regulator, winged helix family. (941 aa)
Sare_4634PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: stp:Strop_4202 DEAD/DEAH box helicase domain protein. (453 aa)
Sare_4657PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4220 ABC transporter related. (363 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (499 aa)
Sare_4709PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4275 ATPase AAA-2 domain protein; Belongs to the ClpA/ClpB family. (844 aa)
Sare_4726KEGG: stp:Strop_4291 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (364 aa)
Sare_4735KEGG: stp:Strop_4299 hypothetical protein. (1114 aa)
Sare_4741PFAM: cell divisionFtsK/SpoIIIE; KEGG: stp:Strop_4305 cell divisionFtsK/SpoIIIE. (879 aa)
ftsHATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (669 aa)
Sare_4753PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: stp:Strop_0474 cell divisionFtsK/SpoIIIE. (1315 aa)
Sare_4781KEGG: stp:Strop_4339 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (703 aa)
Sare_4787Adenylate/guanylate cyclase with TPR repeats; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: stp:Strop_4346 adenylyl cyclase class-3/4/guanylyl cyclase. (1190 aa)
Sare_4793PFAM: Anion-transporting ATPase; KEGG: stp:Strop_4351 anion-transporting ATPase. (325 aa)
Sare_4794KEGG: stp:Strop_4352 hypothetical protein. (383 aa)
Sare_4837PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: stp:Strop_1438 cell divisionFtsK/SpoIIIE. (1320 aa)
Sare_4841PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; Parallel beta-helix repeat; KEGG: sen:SACE_5457 putative sporulation protein (partial match). (1105 aa)
Sare_4843Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: sen:SACE_5446 hypothetical protein. (1151 aa)
Sare_4854Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: stp:Strop_2453 hypothetical protein. (786 aa)
Sare_4875PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4384 ABC transporter related. (279 aa)
Sare_4885PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4410 ABC transporter related. (626 aa)
Sare_4898PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4423 ABC transporter related. (210 aa)
Sare_4935PFAM: Tetratricopeptide TPR_4; KEGG: sus:Acid_5780 serine/threonine protein kinase. (1029 aa)
Sare_4937KEGG: sco:SCO3824 putative ABC-transporter ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (347 aa)
Sare_4970PFAM: type II secretion system protein E; KEGG: stp:Strop_4457 type II secretion system protein E. (504 aa)
Sare_4971KEGG: stp:Strop_4458 hypothetical protein. (266 aa)
Sare_5012PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4500 ABC transporter related. (254 aa)
Sare_5049PFAM: UvrD/REP helicase; KEGG: stp:Strop_4539 UvrD/REP helicase. (1062 aa)
Sare_5052KEGG: stp:Strop_4542 hypothetical protein. (412 aa)
Sare_5064Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (844 aa)
Sare_5105PFAM: Cobyrinic acid ac-diamide synthase; KEGG: stp:Strop_4587 cobyrinic acid a,c-diamide synthase. (437 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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