STRINGSTRING
Sare_0354 Sare_0354 Sare_0569 Sare_0569 Sare_0892 Sare_0892 Sare_1265 Sare_1265 bioA bioA argD argD Sare_2100 Sare_2100 Sare_2960 Sare_2960 Sare_3215 Sare_3215 Sare_4053 Sare_4053 Sare_4941 Sare_4941
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0354Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (430 aa)
Sare_0569PFAM: aminotransferase class-III; KEGG: rpd:RPD_2366 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (435 aa)
Sare_0892PFAM: aminotransferase class-III; KEGG: stp:Strop_0950 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
Sare_1265PFAM: aminotransferase class-III; KEGG: bcy:Bcer98_1682 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (425 aa)
argDTIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: stp:Strop_1891 acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (429 aa)
Sare_2100PFAM: aminotransferase class-III; KEGG: acr:Acry_0545 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)
Sare_2960PFAM: aminotransferase class-III; KEGG: sco:SCO3622 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (457 aa)
Sare_3215PFAM: aminotransferase class-III; KEGG: stp:Strop_2993 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
Sare_4053TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: stp:Strop_3677 ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (404 aa)
Sare_4941Adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; KEGG: ace:Acel_1287 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (452 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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