STRINGSTRING
Sare_0393 Sare_0393 Sare_0747 Sare_0747 Sare_1080 Sare_1080 Sare_1506 Sare_1506 Sare_2552 Sare_2552 Sare_2999 Sare_2999 Sare_3207 Sare_3207 Sare_3494 Sare_3494 Sare_3967 Sare_3967
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0393PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_0934 putative solute binding lipoprotein. (434 aa)
Sare_0747PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_0803 extracellular solute-binding protein, family 1. (433 aa)
Sare_1080PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_1187 extracellular solute-binding protein, family 1. (426 aa)
Sare_1506PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_1557 extracellular solute-binding protein, family 1. (428 aa)
Sare_2552PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_2403 extracellular solute-binding protein, family 1. (443 aa)
Sare_2999PFAM: extracellular solute-binding protein family 1; KEGG: sco:SCO0065 putative extracellular binding protein. (419 aa)
Sare_3207PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_2983 extracellular solute-binding protein, family 1. (467 aa)
Sare_3494PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_3264 extracellular solute-binding protein, family 1. (414 aa)
Sare_3967PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_3587 extracellular solute-binding protein, family 1. (448 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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