STRINGSTRING
Sare_0003 Sare_0003 Sare_0135 Sare_0135 Sare_0462 Sare_0462 Sare_0633 Sare_0633 Sare_0635 Sare_0635 prs prs Sare_0772 Sare_0772 Sare_0820 Sare_0820 Sare_0900 Sare_0900 rbsK rbsK Sare_1272 Sare_1272 Sare_1273 Sare_1273 Sare_1533 Sare_1533 Sare_1660 Sare_1660 Sare_1699 Sare_1699 Sare_1865 Sare_1865 Sare_3005 Sare_3005 Sare_3006 Sare_3006 Sare_3181 Sare_3181 Sare_3316 Sare_3316 tal tal Sare_3318 Sare_3318 zwf zwf pgl pgl pfp pfp Sare_3824 Sare_3824 Sare_3889 Sare_3889 Sare_3976 Sare_3976 Sare_4106 Sare_4106 Sare_4985 Sare_4985 Sare_4986 Sare_4986
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0003TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: stp:Strop_0004 6-phosphogluconate dehydrogenase, decarboxylating. (290 aa)
Sare_0135Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (340 aa)
Sare_0462PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_0391 alcohol dehydrogenase GroES domain protein. (348 aa)
Sare_0633Gluconolactonase; PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: stp:Strop_0658 gluconolactonase. (307 aa)
Sare_0635PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_0661 short-chain dehydrogenase/reductase SDR. (259 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (326 aa)
Sare_0772Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (329 aa)
Sare_0820TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: stp:Strop_0875 fructose-1,6-bisphosphatase, class II. (343 aa)
Sare_0900KEGG: stp:Strop_0963 hypothetical protein. (398 aa)
rbsKPfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (296 aa)
Sare_1272PFAM: Transketolase domain protein; KEGG: sen:SACE_5763 putative transketolase. (245 aa)
Sare_1273PFAM: Transketolase central region; KEGG: sen:SACE_5762 transketolase B subunit. (303 aa)
Sare_1533Phosphoketolase; PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: stp:Strop_1582 phosphoketolase. (800 aa)
Sare_1660PFAM: glucose-6-phosphate dehydrogenase; KEGG: stp:Strop_1668 glucose-6-phosphate dehydrogenase. (481 aa)
Sare_1699TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: stp:Strop_1701 phosphoglucomutase, alpha-D-glucose phosphate-specific. (551 aa)
Sare_1865PFAM: ribulose-phosphate 3-epimerase; KEGG: stp:Strop_1872 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (226 aa)
Sare_3005PFAM: KDPG and KHG aldolase; KEGG: sco:SCO3495 putative 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase. (201 aa)
Sare_3006PFAM: PfkB domain protein; KEGG: psp:PSPPH_2667 2-dehydro-3-deoxygluconokinase. (325 aa)
Sare_3181PFAM: carbohydrate kinase FGGY; KEGG: stp:Strop_2959 carbohydrate kinase, FGGY. (455 aa)
Sare_3316TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: stp:Strop_3089 transketolase; Belongs to the transketolase family. (712 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. (392 aa)
Sare_3318PFAM: phosphoglucose isomerase (PGI); KEGG: stp:Strop_3091 phosphoglucose isomerase (PGI); Belongs to the GPI family. (559 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (505 aa)
pgl6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (256 aa)
pfpDiphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. (342 aa)
Sare_38246-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (478 aa)
Sare_3889Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: stp:Strop_3514 ribose 5-phosphate isomerase. (155 aa)
Sare_3976KEGG: stp:Strop_3595 hypothetical protein. (353 aa)
Sare_4106KEGG: stp:Strop_3725 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase. (312 aa)
Sare_4985PFAM: Transketolase domain protein; KEGG: stp:Strop_4472 transketolase domain protein. (242 aa)
Sare_4986PFAM: Transketolase central region; KEGG: stp:Strop_4473 transketolase, central region. (296 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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