STRINGSTRING
Sare_0287 Sare_0287 Sare_0390 Sare_0390 Sare_0525 Sare_0525 Sare_0692 Sare_0692 Sare_0745 Sare_0745 Sare_0810 Sare_0810 Sare_0900 Sare_0900 Sare_1076 Sare_1076 Sare_1509 Sare_1509 Sare_1699 Sare_1699 Sare_2410 Sare_2410 Sare_2600 Sare_2600 Sare_2896 Sare_2896 Sare_3318 Sare_3318 Sare_3490 Sare_3490 Sare_3501 Sare_3501 Sare_3506 Sare_3506 Sare_3918 Sare_3918 Sare_3983 Sare_3983 Sare_4775 Sare_4775
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0287PFAM: ROK family protein; KEGG: stp:Strop_0246 ROK family protein. (320 aa)
Sare_0390Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: stp:Strop_0326 beta-glucosidase. (467 aa)
Sare_0525Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: stp:Strop_0438 kojibiose phosphorylase. (791 aa)
Sare_0692PFAM: Nucleotidyl transferase; KEGG: stp:Strop_0745 putative UTP-glucose-1-phosphate uridylyltransferase GalU. (318 aa)
Sare_0745PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: stp:Strop_0801 alpha amylase, catalytic region. (543 aa)
Sare_0810HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (274 aa)
Sare_0900KEGG: stp:Strop_0963 hypothetical protein. (398 aa)
Sare_1076PFAM: glycoside hydrolase 15-related; KEGG: stp:Strop_1183 glycoside hydrolase 15-related. (594 aa)
Sare_1509Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: stp:Strop_1560 glycoside hydrolase, family 1. (478 aa)
Sare_1699TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: stp:Strop_1701 phosphoglucomutase, alpha-D-glucose phosphate-specific. (551 aa)
Sare_2410PFAM: glycoside hydrolase family 5; cellulose-binding family II; KEGG: stp:Strop_2285 glycoside hydrolase, family 5. (459 aa)
Sare_2600PFAM: glycoside hydrolase family 3 domain protein; Na-Ca exchanger/integrin-beta4; KEGG: stp:Strop_2444 glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family. (1271 aa)
Sare_2896Alpha-amylase; KEGG: stp:Strop_2686 alpha amylase, catalytic region; PFAM: glycoside hydrolase starch-binding; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain. (722 aa)
Sare_3318PFAM: phosphoglucose isomerase (PGI); KEGG: stp:Strop_3091 phosphoglucose isomerase (PGI); Belongs to the GPI family. (559 aa)
Sare_3490PFAM: PfkB domain protein; KEGG: stp:Strop_3260 PfkB domain protein. (320 aa)
Sare_3501PFAM: glycosyl transferase family 20; KEGG: stp:Strop_3271 alpha,alpha-trehalose-phosphate synthase (UDP-forming). (472 aa)
Sare_3506TIGRFAM: putative glucokinase, ROK family; PFAM: ROK family protein; KEGG: stp:Strop_3274 putative glucokinase, ROK family. (315 aa)
Sare_3918PFAM: glycosyl transferase family 20; KEGG: stp:Strop_3543 alpha,alpha-trehalose-phosphate synthase (UDP-forming). (468 aa)
Sare_3983PFAM: glycoside hydrolase family 6; cellulose-binding family II; KEGG: stp:Strop_3602 glycoside hydrolase, family 6; Belongs to the glycosyl hydrolase family 6. (589 aa)
Sare_4775PFAM: ROK family protein; KEGG: stp:Strop_4333 ROK family protein. (321 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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