STRINGSTRING
Sare_0031 Sare_0031 Sare_0148 Sare_0148 Sare_0776 Sare_0776 Sare_0792 Sare_0792 Sare_0802 Sare_0802 Sare_0851 Sare_0851 Sare_1027 Sare_1027 Sare_1316 Sare_1316 Sare_2155 Sare_2155 Sare_2687 Sare_2687 Sare_2688 Sare_2688 Sare_2803 Sare_2803 Sare_2807 Sare_2807 Sare_2812 Sare_2812 Sare_2815 Sare_2815 Sare_2837 Sare_2837 Sare_2841 Sare_2841 Sare_3214 Sare_3214 Sare_3215 Sare_3215 Sare_3551 Sare_3551 Sare_3610 Sare_3610 Sare_3624 Sare_3624 Sare_3989 Sare_3989 Sare_3991 Sare_3991 Sare_3993 Sare_3993 Sare_4072 Sare_4072 ackA ackA Sare_4093 Sare_4093 sucD sucD sucC sucC Sare_4204 Sare_4204 acsA acsA Sare_4768 Sare_4768 Sare_4961 Sare_4961
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Sare_0031PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: stp:Strop_0025 carbamoyl-phosphate synthase L chain, ATP-binding. (445 aa)
Sare_0148TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: stp:Strop_0142 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (430 aa)
Sare_0776KEGG: stp:Strop_0832 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (527 aa)
Sare_0792Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: stp:Strop_0849 carbamoyl-phosphate synthase L chain, ATP-binding. (583 aa)
Sare_0802PFAM: carboxyl transferase; KEGG: stp:Strop_0856 carboxyl transferase. (527 aa)
Sare_0851KEGG: stp:Strop_0908 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
Sare_1027PFAM: MmgE/PrpD family protein; KEGG: stp:Strop_4385 MmgE/PrpD family protein. (458 aa)
Sare_1316KEGG: stp:Strop_1359 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Sare_2155KEGG: dge:Dgeo_1790 glyoxalase/bleomycin resistance protein/dioxygenase. (139 aa)
Sare_2687PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: stp:Strop_2503 carbamoyl-phosphate synthase L chain, ATP-binding. (458 aa)
Sare_2688acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (205 aa)
Sare_2803PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_2604 enoyl-CoA hydratase/isomerase. (248 aa)
Sare_2807KEGG: stp:Strop_2608 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (377 aa)
Sare_2812KEGG: stp:Strop_2613 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (387 aa)
Sare_2815PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_2616 enoyl-CoA hydratase/isomerase. (281 aa)
Sare_2837PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_2640 enoyl-CoA hydratase/isomerase. (264 aa)
Sare_2841KEGG: stp:Strop_2644 propanoyl-CoA C-acyltransferase. (392 aa)
Sare_3214TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: stp:Strop_2992 methylmalonate-semialdehyde dehydrogenase. (496 aa)
Sare_3215PFAM: aminotransferase class-III; KEGG: stp:Strop_2993 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
Sare_3551TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: stp:Strop_3319 dihydrolipoamide dehydrogenase. (462 aa)
Sare_3610Transketolase domain protein; PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: stp:Strop_3370 transketolase domain protein. (805 aa)
Sare_3624Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: stp:Strop_3382 propionyl-CoA carboxylase. (474 aa)
Sare_3989KEGG: stp:Strop_3608 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (562 aa)
Sare_3991KEGG: stp:Strop_3610 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
Sare_3993PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3611 glyoxalase/bleomycin resistance protein/dioxygenase. (159 aa)
Sare_4072Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (689 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (375 aa)
Sare_4093PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: stp:Strop_3712 biotin/lipoyl attachment domain-containing protein. (73 aa)
sucDsuccinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (392 aa)
Sare_4204PFAM: cobalamin B12-binding domain protein; KEGG: stp:Strop_3814 cobalamin B12-binding domain protein. (134 aa)
acsAacetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (661 aa)
Sare_4768Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: stp:Strop_4328 carbamoyl-phosphate synthase L chain, ATP-binding. (674 aa)
Sare_4961PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_4447 hypothetical protein. (253 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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