STRINGSTRING
Sare_2441 Sare_2441 Sare_2810 Sare_2810 Sare_2811 Sare_2811 Sare_2826 Sare_2826 Sare_2861 Sare_2861 Sare_2876 Sare_2876 Sare_2877 Sare_2877 Sare_2878 Sare_2878 Sare_2879 Sare_2879 Sare_2880 Sare_2880 Sare_2882 Sare_2882 Sare_2883 Sare_2883 Sare_2884 Sare_2884 Sare_4224 Sare_4224 Sare_5016 Sare_5016
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_2441KEGG: mav:MAV_0635 hypothetical protein. (133 aa)
Sare_2810KEGG: stp:Strop_2611 cholesterol oxidase. (543 aa)
Sare_2811PFAM: cytochrome P450; KEGG: stp:Strop_2612 cytochrome P450. (408 aa)
Sare_2826PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2629 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (549 aa)
Sare_2861PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_2660 AMP-dependent synthetase and ligase. (508 aa)
Sare_2876PFAM: flavin reductase domain protein FMN-binding; KEGG: stp:Strop_2668 flavin reductase domain protein, FMN-binding. (185 aa)
Sare_2877PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_2669 biphenyl-2,3-diol 1,2-dioxygenase. (299 aa)
Sare_2878PFAM: alpha/beta hydrolase fold; KEGG: stp:Strop_2670 alpha/beta hydrolase fold. (283 aa)
Sare_2879PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2671 acyl-CoA dehydrogenase, type 2, C-terminal domain. (390 aa)
Sare_2880PFAM: Rieske [2Fe-2S] domain protein; KEGG: stp:Strop_2672 Rieske (2Fe-2S) domain protein. (377 aa)
Sare_2882PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: stp:Strop_2674 ferredoxin. (341 aa)
Sare_2883PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2675 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (530 aa)
Sare_2884PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2676 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (557 aa)
Sare_4224PFAM: FAD dependent oxidoreductase; KEGG: stp:Strop_3834 FAD dependent oxidoreductase. (564 aa)
Sare_5016PFAM: flavin reductase domain protein FMN-binding; KEGG: stp:Strop_4506 flavin reductase domain protein, FMN-binding. (229 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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