STRINGSTRING
Bphy_0165 Bphy_0165 Bphy_0176 Bphy_0176 Bphy_0178 Bphy_0178 Bphy_0198 Bphy_0198 Bphy_0384 Bphy_0384 Bphy_0385 Bphy_0385 Bphy_0386 Bphy_0386 Bphy_0387 Bphy_0387 Bphy_0388 Bphy_0388 Bphy_0683 Bphy_0683 Bphy_0684 Bphy_0684 Bphy_0757 Bphy_0757 Bphy_0762 Bphy_0762 Bphy_0763 Bphy_0763 Bphy_0764 Bphy_0764 Bphy_0970 Bphy_0970 Bphy_0975 Bphy_0975 Bphy_1027 Bphy_1027 Bphy_1028 Bphy_1028 Bphy_1030 Bphy_1030 Bphy_1562 Bphy_1562 Bphy_1563 Bphy_1563 Bphy_1567 Bphy_1567 Bphy_1652 Bphy_1652 Bphy_1700 Bphy_1700 Bphy_1703 Bphy_1703 Bphy_1983 Bphy_1983 Bphy_1984 Bphy_1984 Bphy_1985 Bphy_1985 Bphy_1986 Bphy_1986 Bphy_1987 Bphy_1987 Bphy_1988 Bphy_1988 Bphy_1989 Bphy_1989 Bphy_1990 Bphy_1990 Bphy_1991 Bphy_1991 Bphy_1992 Bphy_1992 Bphy_1993 Bphy_1993 Bphy_2431 Bphy_2431 Bphy_2438 Bphy_2438 Bphy_2688 Bphy_2688 Bphy_2690 Bphy_2690 Bphy_3178 Bphy_3178 Bphy_3179 Bphy_3179 Bphy_3559 Bphy_3559 Bphy_3560 Bphy_3560 Bphy_3561 Bphy_3561 Bphy_3562 Bphy_3562 Bphy_3683 Bphy_3683 Bphy_3767 Bphy_3767 Bphy_3934 Bphy_3934 Bphy_3938 Bphy_3938 Bphy_4250 Bphy_4250 Bphy_4273 Bphy_4273 Bphy_4497 Bphy_4497 Bphy_4827 Bphy_4827 Bphy_4828 Bphy_4828 Bphy_4829 Bphy_4829 Bphy_4830 Bphy_4830 Bphy_4831 Bphy_4831 Bphy_4841 Bphy_4841 Bphy_4887 Bphy_4887 Bphy_4922 Bphy_4922 Bphy_4941 Bphy_4941 Bphy_5126 Bphy_5126 Bphy_5129 Bphy_5129 Bphy_5130 Bphy_5130 Bphy_5131 Bphy_5131
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_0165PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A4270 putative hydroxymethylglutaryl-CoA lyase. (308 aa)
Bphy_0176PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A4257 putative acyl-CoA dehydrogenase. (376 aa)
Bphy_0178KEGG: bxe:Bxe_A4255 putative acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
Bphy_0198PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A4233 putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (286 aa)
Bphy_0384PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A4039 transcriptional regulator, TetR family. (201 aa)
Bphy_0385PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_A6048 acyl-CoA dehydrogenase-like. (595 aa)
Bphy_0386PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A4037 putative 3-hydroxyacyl-CoA dehydrogenase. (814 aa)
Bphy_0387TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bxe:Bxe_A4036 thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
Bphy_0388PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A4035 putative enoyl-CoA hydratase/isomerase. (254 aa)
Bphy_0683Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B0974 predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family. (416 aa)
Bphy_0684PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B0975 acyl-CoA dehydrogenase. (379 aa)
Bphy_0757PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0993 enoyl-CoA hydratase/isomerase family protein. (269 aa)
Bphy_0762PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit. (249 aa)
Bphy_0763PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bcn:Bcen_0584 electron transfer flavoprotein, alpha subunit. (311 aa)
Bphy_0764PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 putative acyl-CoA dehydrogenase. (596 aa)
Bphy_0970KEGG: bxe:Bxe_A2342 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
Bphy_0975KEGG: bxe:Bxe_A2335 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
Bphy_1027PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2275 putative medium-chain-fatty-acid-CoA ligase. (560 aa)
Bphy_1028PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A2274 3-hydroxyacyl-CoA dehydrogenase. (694 aa)
Bphy_1030KEGG: bxe:Bxe_A2273 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
Bphy_1562KEGG: bte:BTH_I2607 3-oxoadipate CoA-succinyl transferase beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase. (213 aa)
Bphy_1563KEGG: bxe:Bxe_A1366 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase. (234 aa)
Bphy_1567Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (557 aa)
Bphy_1652PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A2495 putative enoyl(3-hydroxyisobutyryl)-coenzyme A hydratase/isomerase. (376 aa)
Bphy_1700PFAM: acyl-CoA dehydrogenase domain protein; Protein of unknown function DUF1974; KEGG: bxe:Bxe_A2774 putative transmembrane acyl-CoA dehydrogenase. (889 aa)
Bphy_1703KEGG: bxe:Bxe_A2777 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (442 aa)
Bphy_1983PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A3184 putative 3-hydroxyacyl-CoA dehydrogenase, PaaC-like. (526 aa)
Bphy_1984PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A3185 putative enoyl-CoA hydratase, PaaB-like; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)
Bphy_1985PFAM: Phosphoglycerate mutase; KEGG: bxe:Bxe_A3186 putative phosphoglycerate mutase. (240 aa)
Bphy_1986PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A3187 putative tyrosine protein kinase/aminoglycoside phosphotransferase. (368 aa)
Bphy_1987PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3188 putative acyl-CoA dehydrogenase oxidoreductase. (412 aa)
Bphy_1988PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A5556 glutathione S-transferase-like; Belongs to the GST superfamily. (233 aa)
Bphy_1989PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A3189 putative nodulation-related acyl dehydratase, MaoC/NodN-like. (158 aa)
Bphy_1990PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A3190 putative (R)-specific enoyl-CoA hydratase, MaoC-like. (152 aa)
Bphy_1991PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3191 putative pimeloyl-CoA dehydrogenase (small subunit), PimD-like. (375 aa)
Bphy_1992PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A3192 putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like. (398 aa)
Bphy_1993PFAM: protein of unknown function DUF1178; KEGG: bxe:Bxe_A3193 conserved hypothetical protein DUF1178. (147 aa)
Bphy_2431PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A3896 putative enoyl-CoA hydratase/isomerase. (292 aa)
Bphy_2438PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A3906 acyl-CoA dehydrogenase-like. (396 aa)
Bphy_2688PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0471 putative enoyl-CoA hydratase I (PaaF); Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
Bphy_2690TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: bxe:Bxe_A0469 ketoathiolase (PaaJ); Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Bphy_3178PFAM: CoA-binding domain protein; KEGG: rle:pRL120177 putative pimeloyl-CoA synthetase. (718 aa)
Bphy_3179PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_3350 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)
Bphy_3559Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bxe:Bxe_B0963 putative biotin carboxylase. (670 aa)
Bphy_3560PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B0962 putative enoyl coenzyme A hydratase-like protein; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
Bphy_3561Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bxe:Bxe_B0961 propionyl-CoA carboxylase. (535 aa)
Bphy_3562PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0960 isovaleryl-CoA dehydrogenase. (393 aa)
Bphy_3683PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_3642 probable acyl-CoA dehydrogenase. (384 aa)
Bphy_3767KEGG: bxe:Bxe_B2167 beta-ketoadipyl-CoA thiolase (PcaF); TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Bphy_3934PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 putative acyl-CoA dehydrogenase. (596 aa)
Bphy_3938PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 putative acyl-CoA dehydrogenase. (600 aa)
Bphy_4250PFAM: pyruvate carboxyltransferase; KEGG: pfo:Pfl_1315 pyruvate carboxyltransferase. (315 aa)
Bphy_4273PFAM: coenzyme A transferase; KEGG: dar:Daro_0457 coenzyme A transferase. (673 aa)
Bphy_4497KEGG: bxe:Bxe_B0739 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
Bphy_4827Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (555 aa)
Bphy_4828PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bmn:BMA10247_0219 electron transfer flavoprotein, alpha subunit. (312 aa)
Bphy_4829PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit. (249 aa)
Bphy_4830PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dsy:DSY3372 hypothetical protein. (263 aa)
Bphy_4831PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: lbl:LBL_0679 electron transfer flavoprotein, alpha subunit. (325 aa)
Bphy_4841PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_C1034 putative enoyl-CoA hydratase/isomerase. (254 aa)
Bphy_4887PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_C6037 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)
Bphy_4922PFAM: Thiolase; KEGG: acr:Acry_2397 propanoyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (386 aa)
Bphy_4941KEGG: bur:Bcep18194_C6652 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
Bphy_5126PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1084 butyryl-CoA dehydrogenase. (377 aa)
Bphy_5129KEGG: bxe:Bxe_B1087 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Belongs to the HIBADH-related family. (297 aa)
Bphy_5130PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B1088 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (268 aa)
Bphy_5131PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B1089 enoyl-CoA hydratase/isomerase family. (383 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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