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Bphy_0118 Bphy_0118 Bphy_0119 Bphy_0119 Bphy_0120 Bphy_0120 Bphy_0126 Bphy_0126 Bphy_0186 Bphy_0186 Bphy_0228 Bphy_0228 Bphy_0267 Bphy_0267 Bphy_0268 Bphy_0268 Bphy_0276 Bphy_0276 Bphy_0277 Bphy_0277 Bphy_0279 Bphy_0279 Bphy_0281 Bphy_0281 Bphy_0283 Bphy_0283 Bphy_0284 Bphy_0284 Bphy_0285 Bphy_0285 ctaB ctaB Bphy_0287 Bphy_0287 Bphy_0297 Bphy_0297 Bphy_0298 Bphy_0298 Bphy_0299 Bphy_0299 Bphy_0300 Bphy_0300 Bphy_0311 Bphy_0311 Bphy_0346 Bphy_0346 Bphy_0347 Bphy_0347 Bphy_0348 Bphy_0348 Bphy_0349 Bphy_0349 Bphy_0350 Bphy_0350 Bphy_0351 Bphy_0351 Bphy_0401 Bphy_0401 Bphy_0428 Bphy_0428 Bphy_0429 Bphy_0429 msrA msrA Bphy_0540 Bphy_0540 Bphy_0634 Bphy_0634 dsbB dsbB Bphy_0855 Bphy_0855 Bphy_0856 Bphy_0856 Bphy_0857 Bphy_0857 rnhA rnhA Bphy_0869 Bphy_0869 gloB gloB Bphy_0921 Bphy_0921 Bphy_0950 Bphy_0950 ahpD ahpD Bphy_1001 Bphy_1001 Bphy_1023 Bphy_1023 Bphy_1024 Bphy_1024 Bphy_1025 Bphy_1025 selO selO Bphy_1140 Bphy_1140 Bphy_1483 Bphy_1483 Bphy_1484 Bphy_1484 Bphy_1485 Bphy_1485 Bphy_1486 Bphy_1486 Bphy_1618 Bphy_1618 Bphy_1774 Bphy_1774 Bphy_1775 Bphy_1775 Bphy_1968 Bphy_1968 nuoN nuoN Bphy_1997 Bphy_1997 Bphy_1998 Bphy_1998 nuoK nuoK Bphy_2000 Bphy_2000 nuoI nuoI nuoH nuoH Bphy_2003 Bphy_2003 Bphy_2004 Bphy_2004 Bphy_2005 Bphy_2005 nuoD nuoD nuoC nuoC nuoB nuoB nuoA nuoA Bphy_2099 Bphy_2099 Bphy_2100 Bphy_2100 Bphy_2188 Bphy_2188 Bphy_2222 Bphy_2222 Bphy_2439 Bphy_2439 Bphy_2493 Bphy_2493 tpx tpx Bphy_2706 Bphy_2706 Bphy_2723 Bphy_2723 Bphy_2741 Bphy_2741 Bphy_2742 Bphy_2742 Bphy_2743 Bphy_2743 msrQ msrQ msrP msrP Bphy_2805 Bphy_2805 Bphy_2806 Bphy_2806 Bphy_2807 Bphy_2807 dsbD dsbD Bphy_2899 Bphy_2899 Bphy_2999 Bphy_2999 Bphy_3163 Bphy_3163 Bphy_3646 Bphy_3646 Bphy_3647 Bphy_3647 Bphy_3648 Bphy_3648 Bphy_3649 Bphy_3649 Bphy_3656 Bphy_3656 Bphy_3657 Bphy_3657 Bphy_3740 Bphy_3740 Bphy_3756 Bphy_3756 Bphy_3968 Bphy_3968 Bphy_3969 Bphy_3969 Bphy_3970 Bphy_3970 Bphy_3971 Bphy_3971 Bphy_3973 Bphy_3973 Bphy_4109 Bphy_4109 Bphy_4263 Bphy_4263 Bphy_4264 Bphy_4264 Bphy_4265 Bphy_4265 Bphy_4266 Bphy_4266 Bphy_4267 Bphy_4267 Bphy_4316 Bphy_4316 Bphy_4478 Bphy_4478 selA selA Bphy_4601 Bphy_4601 selD selD Bphy_4666 Bphy_4666 Bphy_4667 Bphy_4667 Bphy_4668 Bphy_4668 Bphy_4669 Bphy_4669 Bphy_4670 Bphy_4670 Bphy_4671 Bphy_4671 Bphy_4672 Bphy_4672 Bphy_4775 Bphy_4775 Bphy_4792 Bphy_4792 Bphy_4793 Bphy_4793 Bphy_4794 Bphy_4794 Bphy_4795 Bphy_4795 Bphy_5001 Bphy_5001 Bphy_5020 Bphy_5020 Bphy_5033 Bphy_5033 Bphy_5118 Bphy_5118 Bphy_5119 Bphy_5119 Bphy_5120 Bphy_5120 Bphy_5356 Bphy_5356 msrA-2 msrA-2 Bphy_5424 Bphy_5424 Bphy_5425 Bphy_5425 Bphy_5487 Bphy_5487 Bphy_5489 Bphy_5489 Bphy_5490 Bphy_5490 Bphy_5491 Bphy_5491
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
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gene neighborhood
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gene co-occurrence
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Bphy_0118PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A4319 transcriptional regulator, AsnC family. (152 aa)
Bphy_0119KEGG: bxe:Bxe_A4318 hypothetical protein. (204 aa)
Bphy_0120PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_A4317 putative metallo-beta-lactamase family protein. (214 aa)
Bphy_0126PFAM: cytochrome c class I; KEGG: bxe:Bxe_A4310 putative cytochrome c, class I. (115 aa)
Bphy_0186PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_A4247 putative thiol-disulfide interchange protein. (212 aa)
Bphy_0228Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A4194 putative thiol-disulfide isomerase and thioredoxins. (174 aa)
Bphy_0267PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_A4180 putative rhodanese-related sulfurtransferase. (161 aa)
Bphy_0268Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. (82 aa)
Bphy_0276Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (557 aa)
Bphy_0277Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (537 aa)
Bphy_0279PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bxe:Bxe_A4169 putative cytochrome c oxidase assembly protein. (203 aa)
Bphy_0281PFAM: cytochrome c oxidase subunit III; KEGG: bte:BTH_I0430 cytochrome c oxidase subunit III. (285 aa)
Bphy_0283KEGG: bxe:Bxe_A4165 hypothetical protein. (255 aa)
Bphy_0284KEGG: bxe:Bxe_A4164 hypothetical protein. (223 aa)
Bphy_0285PFAM: cytochrome oxidase assembly; KEGG: bxe:Bxe_A4163 putative cytochrome oxidase assembly protein. (369 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (301 aa)
Bphy_0287Electron transport protein SCO1/SenC; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: bxe:Bxe_A4161 electron transport protein SCO1/SenC. (205 aa)
Bphy_0297TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bte:BTH_I2310 cyd operon protein YbgT, putative. (39 aa)
Bphy_0298KEGG: bxe:Bxe_A4149 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II. (378 aa)
Bphy_0299PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_A1908 cytochrome bd ubiquinol oxidase, subunit I. (529 aa)
Bphy_0300KEGG: bxe:Bxe_A1909 hypothetical protein. (90 aa)
Bphy_0311PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A4137 ferredoxin. (85 aa)
Bphy_0346KEGG: bxe:Bxe_A4079 putative cytochrome c, class I. (269 aa)
Bphy_0347PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_A4078 putative cytochrome c oxidase, subunit I. (541 aa)
Bphy_0348PFAM: cytochrome c oxidase subunit II; KEGG: bxe:Bxe_A4077 putative cytochrome c oxidase subunit II. (190 aa)
Bphy_0349KEGG: bxe:Bxe_A4076 hypothetical protein. (60 aa)
Bphy_0350Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_A4075 putative cytochrome c precursor. (461 aa)
Bphy_0351KEGG: bxe:Bxe_A4074 putative periplasmic cytochrome c protein. (240 aa)
Bphy_0401Lactoylglutathione lyase; KEGG: bxe:Bxe_A4018 glyoxalase I; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (128 aa)
Bphy_0428Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0650 putative periplasmic cytochrome c. (432 aa)
Bphy_0429PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0651 putative periplasmic cytochrome c. (239 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (183 aa)
Bphy_0540Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (192 aa)
Bphy_0634TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A3442 thioredoxin reductase. (333 aa)
dsbBDisulphide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (168 aa)
Bphy_0855KEGG: bxe:Bxe_A1238 putative inner membrane protein. (296 aa)
Bphy_0856PFAM: protein of unknown function DUF461; KEGG: bxe:Bxe_A1239 hypothetical protein. (159 aa)
Bphy_0857PFAM: electron transport protein SCO1/SenC; KEGG: bxe:Bxe_A1240 electron transport protein SCO1/SenC. (208 aa)
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (148 aa)
Bphy_0869PFAM: Methyltransferase type 11; KEGG: bxe:Bxe_A1252 hypothetical protein. (271 aa)
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (267 aa)
Bphy_0921PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A2391 putative bacterioferritin comigratory oxidoreductase. (153 aa)
Bphy_0950TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bxe:Bxe_A2362 thioredoxin; Belongs to the thioredoxin family. (108 aa)
ahpDAlkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (174 aa)
Bphy_1001PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A2309 putative alkyl hydroperoxide reductase subunit C. (182 aa)
Bphy_1023PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bch:Bcen2424_1912 PpiC-type peptidyl-prolyl cis-trans isomerase. (259 aa)
Bphy_1024PFAM: BolA family protein; KEGG: bxe:Bxe_A2279 putative stress-induced morphogene BolA-like protein; Belongs to the BolA/IbaG family. (104 aa)
Bphy_1025Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (176 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (505 aa)
Bphy_1140KEGG: bte:BTH_II0457 cytochrome c family protein. (114 aa)
Bphy_1483PFAM: molybdopterin binding domain; KEGG: bxe:Bxe_A1519 hypothetical protein. (277 aa)
Bphy_1484KEGG: bxe:Bxe_A1518 hypothetical protein. (289 aa)
Bphy_1485PFAM: fatty acid hydroxylase; KEGG: bxe:Bxe_A1517 hypothetical protein. (327 aa)
Bphy_1486TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; KEGG: bxe:Bxe_A1516 hypothetical protein. (337 aa)
Bphy_1618PFAM: cytochrome c oxidase subunit II; KEGG: bpd:BURPS668_2257 putative cytochrome c oxidase subunit. (125 aa)
Bphy_1774KEGG: bxe:Bxe_A2910 putative signal peptide transmembrane protein. (154 aa)
Bphy_1775PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A2911 putative peroxiredoxin, bacterioferritin comigratory protein. (187 aa)
Bphy_1968PFAM: Heavy metal transport/detoxification protein; KEGG: bxe:Bxe_A3162 heavy metal binding protein. (69 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (492 aa)
Bphy_1997KEGG: bxe:Bxe_A3202 putative transmembrane NADH dehydrogenase I(chain M), NuoM; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (497 aa)
Bphy_1998KEGG: bxe:Bxe_A3203 putative transmembrane NADH dehydrogenase I(chain L), NuoL; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I). (689 aa)
nuoKNADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
Bphy_2000NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (222 aa)
nuoINADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
nuoHNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (354 aa)
Bphy_2003NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (777 aa)
Bphy_2004NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (442 aa)
Bphy_2005TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bxe:Bxe_A3210 putative NADH dehydrogenase I (chain E), NuoE. (161 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa)
nuoCNADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (200 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity). (159 aa)
nuoANADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (123 aa)
Bphy_2099PFAM: cytochrome c class I; KEGG: bxe:Bxe_A3313 putative cytochrome c precursor-related protein. (127 aa)
Bphy_2100PFAM: cytochrome c class I; KEGG: bxe:Bxe_A3314 putative cytochrome c precursor-related protein. (126 aa)
Bphy_2188PFAM: superoxide dismutase copper/zinc binding; KEGG: bxe:Bxe_A3479 putative copper/zinc superoxide dismutase. (206 aa)
Bphy_2222PFAM: cytochrome c class I; KEGG: bxe:Bxe_A3635 putative cytochrome c, class I. (108 aa)
Bphy_2439Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A3905 peroxidase. (212 aa)
Bphy_2493PFAM: deoxynucleoside kinase; KEGG: bxe:Bxe_A3957 putative deoxynucleoside kinase. (231 aa)
tpxRedoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (166 aa)
Bphy_2706Putative thiol-disulfide interchange protein, DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (241 aa)
Bphy_2723TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bam:Bamb_0412 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. (103 aa)
Bphy_2741PFAM: cytochrome c1; KEGG: bxe:Bxe_A0416 putative cytochrome c1 transmembrane protein. (251 aa)
Bphy_2742Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (460 aa)
Bphy_2743Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (205 aa)
msrQFerric reductase domain protein transmembrane component domain; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the r [...] (237 aa)
msrPOxidoreductase molybdopterin binding; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce b [...] (331 aa)
Bphy_2805TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: bxe:Bxe_A0348 cytochrome c assembly protein. (405 aa)
Bphy_2806PFAM: ResB family protein; KEGG: bxe:Bxe_A0347 cytochrome c biogenesis protein. (741 aa)
Bphy_2807PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0346 cytochrome c, class I. (217 aa)
dsbDProtein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (618 aa)
Bphy_2899NADH dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_A0199 hypothetical protein. (318 aa)
Bphy_2999PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0061 cytochrome c family protein. (319 aa)
Bphy_3163PFAM: TrkA-N domain protein; NmrA family protein; KEGG: bxe:Bxe_B1674 hypothetical protein. (293 aa)
Bphy_3646TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bte:BTH_I1785 ubiquinol oxidase, subunit IV. (113 aa)
Bphy_3647TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bps:BPSL2380 cytochrome o ubiquinol oxidase subunit III. (204 aa)
Bphy_3648KEGG: bmn:BMA10247_A0226 ubiquinol oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (670 aa)
Bphy_3649TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bvi:Bcep1808_2823 ubiquinol oxidase, subunit II. (299 aa)
Bphy_3656TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1206 AhpF. (530 aa)
Bphy_3657Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
Bphy_3740PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_6193 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (351 aa)
Bphy_3756PFAM: Di-haem cytochrome c peroxidase; KEGG: bch:Bcen2424_4344 di-haem cytochrome c peroxidase. (480 aa)
Bphy_3968TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bxe:Bxe_B1637 cytochrome o ubiquinol oxidase subunit II. (300 aa)
Bphy_3969KEGG: bxe:Bxe_B1636 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (668 aa)
Bphy_3970TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_B1635 CyoC. (201 aa)
Bphy_3971TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bxe:Bxe_B1634 CyoD. (114 aa)
Bphy_3973KEGG: bxe:Bxe_B1638 proton-translocating NADH-quinoneoxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (511 aa)
Bphy_4109PFAM: Thioredoxin domain; KEGG: bxe:Bxe_B1336 putative thioredoxin. (107 aa)
Bphy_4263PFAM: protein of unknown function DUF1006; KEGG: bxe:Bxe_B2989 hypothetical protein. (404 aa)
Bphy_4264KEGG: bxe:Bxe_B2988 hypothetical protein. (97 aa)
Bphy_4265PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bxe:Bxe_B2987 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (567 aa)
Bphy_4266SMART: Rhodanese domain protein; KEGG: bxe:Bxe_B2986 putative DedA protein. (329 aa)
Bphy_4267KEGG: bxe:Bxe_B2985 hypothetical protein. (83 aa)
Bphy_4316Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3665 heavy metal translocating P-type ATPase. (835 aa)
Bphy_4478PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1399 putative lactoylglutathione lyase. (132 aa)
selAL-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (478 aa)
Bphy_4601KEGG: bpd:BURPS668_A0079 hypothetical protein. (335 aa)
selDSelenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. (353 aa)
Bphy_4666PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0873 putative dihydrodipicolinate synthase; Belongs to the DapA family. (301 aa)
Bphy_4667PFAM: proline racemase; KEGG: bxe:Bxe_B0874 putative proline racemase; Belongs to the proline racemase family. (344 aa)
Bphy_4668PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0875 putative oxidoreductase. (379 aa)
Bphy_4669PFAM: ferredoxin; KEGG: bxe:Bxe_B0876 putative ferredoxin-containing oxidase. (90 aa)
Bphy_4670FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0877 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (427 aa)
Bphy_4671Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: bxe:Bxe_B0878 transcriptional regulator, AraC family. (279 aa)
Bphy_4672KEGG: bxe:Bxe_B0879 hypothetical protein. (111 aa)
Bphy_4775PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: esa:ESA_02947 hypothetical protein. (234 aa)
Bphy_4792TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bxe:Bxe_C0167 putative cytochrome c oxidase subunit II. (354 aa)
Bphy_4793TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_C0168 putative cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (874 aa)
Bphy_4794KEGG: bxe:Bxe_C0169 hypothetical protein. (116 aa)
Bphy_4795KEGG: bxe:Bxe_C0170 hypothetical protein. (322 aa)
Bphy_5001KEGG: bte:BTH_II0363 hypothetical protein. (90 aa)
Bphy_5020PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_A2177 putative oxidoreductase, molybdopterin binding. (258 aa)
Bphy_5033Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bch:Bcen2424_6244 cytochrome c biogenesis protein, transmembrane region. (581 aa)
Bphy_5118KEGG: bmn:BMA10247_A2102 hypothetical protein. (50 aa)
Bphy_5119TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bxe:Bxe_B1811 cytochrome bd ubiquinol oxidase, subunit II. (333 aa)
Bphy_5120PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_B1810 putative cytochrome oxidase subunit I. (465 aa)
Bphy_5356Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. (92 aa)
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (245 aa)
Bphy_5424Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bxe:Bxe_B0816 putative transmembrane protein. (604 aa)
Bphy_5425TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bur:Bcep18194_C6665 methionine sulfoxide reductase B. (174 aa)
Bphy_5487Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_C0083 putative alcohol dehydrogenase cytochrome c subunit. (451 aa)
Bphy_5489PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_A2185 putative cytochrome c oxidase, subunit III. (208 aa)
Bphy_5490Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (669 aa)
Bphy_5491TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bxe:Bxe_A2183 putative cytochrome c oxidase polypeptide II precursor. (355 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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