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Bphy_0347 Bphy_0347 Bphy_0348 Bphy_0348 Bphy_1618 Bphy_1618 Bphy_2741 Bphy_2741 Bphy_2742 Bphy_2742 Bphy_2743 Bphy_2743 Bphy_4792 Bphy_4792 Bphy_4793 Bphy_4793 Bphy_5487 Bphy_5487 Bphy_5489 Bphy_5489 Bphy_5490 Bphy_5490 Bphy_5491 Bphy_5491
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_0347PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_A4078 putative cytochrome c oxidase, subunit I. (541 aa)
Bphy_0348PFAM: cytochrome c oxidase subunit II; KEGG: bxe:Bxe_A4077 putative cytochrome c oxidase subunit II. (190 aa)
Bphy_1618PFAM: cytochrome c oxidase subunit II; KEGG: bpd:BURPS668_2257 putative cytochrome c oxidase subunit. (125 aa)
Bphy_2741PFAM: cytochrome c1; KEGG: bxe:Bxe_A0416 putative cytochrome c1 transmembrane protein. (251 aa)
Bphy_2742Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (460 aa)
Bphy_2743Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (205 aa)
Bphy_4792TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bxe:Bxe_C0167 putative cytochrome c oxidase subunit II. (354 aa)
Bphy_4793TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_C0168 putative cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (874 aa)
Bphy_5487Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_C0083 putative alcohol dehydrogenase cytochrome c subunit. (451 aa)
Bphy_5489PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_A2185 putative cytochrome c oxidase, subunit III. (208 aa)
Bphy_5490Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (669 aa)
Bphy_5491TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bxe:Bxe_A2183 putative cytochrome c oxidase polypeptide II precursor. (355 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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