STRINGSTRING
Bphy_1023 Bphy_1023 Bphy_1024 Bphy_1024 Bphy_1025 Bphy_1025 selO selO Bphy_2723 Bphy_2723 Bphy_5356 Bphy_5356
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_1023PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bch:Bcen2424_1912 PpiC-type peptidyl-prolyl cis-trans isomerase. (259 aa)
Bphy_1024PFAM: BolA family protein; KEGG: bxe:Bxe_A2279 putative stress-induced morphogene BolA-like protein; Belongs to the BolA/IbaG family. (104 aa)
Bphy_1025Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (176 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (505 aa)
Bphy_2723TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bam:Bamb_0412 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. (103 aa)
Bphy_5356Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. (92 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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