STRINGSTRING
Bphy_0559 Bphy_0559 Bphy_0560 Bphy_0560 Bphy_0562 Bphy_0562 Bphy_0563 Bphy_0563 Bphy_1280 Bphy_1280 Bphy_1687 Bphy_1687 Bphy_3226 Bphy_3226 Bphy_4721 Bphy_4721 Bphy_5041 Bphy_5041 Bphy_5254 Bphy_5254 Bphy_5256 Bphy_5256 Bphy_5257 Bphy_5257
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_0559TIGRFAM: high-affinity nickel-transporter; KEGG: bxe:Bxe_A0791 high-affinity nickel-transporter, (NiCoT) family; Belongs to the NiCoT transporter (TC 2.A.52) family. (339 aa)
Bphy_0560PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A0792 hypothetical protein. (161 aa)
Bphy_0562PFAM: protein of unknown function DUF192; KEGG: bxe:Bxe_A0794 hypothetical protein. (171 aa)
Bphy_0563Hypothetical protein. (80 aa)
Bphy_1280TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bxe:Bxe_A1949 Mn2+/Fe2+ transporters, NRAMP family, MntH. (448 aa)
Bphy_1687KEGG: rle:RL2412 putative calcium binding protein. (463 aa)
Bphy_3226TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bxe:Bxe_A1949 Mn2+/Fe2+ transporters, NRAMP family, MntH. (473 aa)
Bphy_4721KEGG: bps:BPSL0295 putative natural resistance-associated macrophage protein. (547 aa)
Bphy_5041PFAM: protein of unknown function DUF347; KEGG: bvi:Bcep1808_7223 protein of unknown function DUF347. (251 aa)
Bphy_5254PFAM: Putative ParB-like nuclease; KEGG: rpa:RPA2024 hypothetical protein. (203 aa)
Bphy_5256KEGG: bam:Bamb_4086 natural resistance-associated macrophage protein. (409 aa)
Bphy_5257PFAM: natural resistance-associated macrophage protein; KEGG: bvi:Bcep1808_5219 natural resistance-associated macrophage protein. (432 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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