STRINGSTRING
Bphy_0559 Bphy_0559 Bphy_3968 Bphy_3968 Bphy_3649 Bphy_3649 Bphy_3648 Bphy_3648 Bphy_3647 Bphy_3647 Bphy_3503 Bphy_3503 Bphy_3245 Bphy_3245 Bphy_3226 Bphy_3226 Bphy_3191 Bphy_3191 Bphy_3138 Bphy_3138 atpB-2 atpB-2 atpE-2 atpE-2 atpF-2 atpF-2 atpH atpH atpA-2 atpA-2 atpG atpG atpD-2 atpD-2 atpC-2 atpC-2 Bphy_2977 Bphy_2977 Bphy_2976 Bphy_2976 Bphy_2934 Bphy_2934 Bphy_2743 Bphy_2743 Bphy_2742 Bphy_2742 kdpA kdpA kdpB kdpB kdpC kdpC Bphy_1956 Bphy_1956 Bphy_1955 Bphy_1955 Bphy_1761 Bphy_1761 Bphy_1618 Bphy_1618 Bphy_1494 Bphy_1494 kup kup Bphy_1280 Bphy_1280 corA corA atpD atpD atpC atpC Bphy_3969 Bphy_3969 Bphy_3970 Bphy_3970 Bphy_4091 Bphy_4091 Bphy_4204 Bphy_4204 Bphy_4205 Bphy_4205 Bphy_4316 Bphy_4316 mntH mntH Bphy_4721 Bphy_4721 kup-2 kup-2 Bphy_4758 Bphy_4758 Bphy_4793 Bphy_4793 Bphy_4800 Bphy_4800 Bphy_5256 Bphy_5256 Bphy_5257 Bphy_5257 Bphy_5265 Bphy_5265 Bphy_5383 Bphy_5383 Bphy_5489 Bphy_5489 Bphy_5490 Bphy_5490 atpB atpB atpE atpE atpF atpF atpA atpA Bphy_1121 Bphy_1121 Bphy_1119 Bphy_1119 Bphy_0688 Bphy_0688 Bphy_0486 Bphy_0486 Bphy_0348 Bphy_0348 Bphy_0347 Bphy_0347 Bphy_0281 Bphy_0281 Bphy_0277 Bphy_0277 Bphy_0276 Bphy_0276 Bphy_0257 Bphy_0257 Bphy_0218 Bphy_0218
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_0559TIGRFAM: high-affinity nickel-transporter; KEGG: bxe:Bxe_A0791 high-affinity nickel-transporter, (NiCoT) family; Belongs to the NiCoT transporter (TC 2.A.52) family. (339 aa)
Bphy_3968TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bxe:Bxe_B1637 cytochrome o ubiquinol oxidase subunit II. (300 aa)
Bphy_3649TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bvi:Bcep1808_2823 ubiquinol oxidase, subunit II. (299 aa)
Bphy_3648KEGG: bmn:BMA10247_A0226 ubiquinol oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (670 aa)
Bphy_3647TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bps:BPSL2380 cytochrome o ubiquinol oxidase subunit III. (204 aa)
Bphy_3503PFAM: TrkA-N domain protein; KEGG: cyb:CYB_1806 potassium transporter, voltage-gated ion channel (VIC) family. (261 aa)
Bphy_3245PFAM: sodium/calcium exchanger membrane region; KEGG: bxe:Bxe_B1680 Ca2+/H+ antiporter, CaCA family. (382 aa)
Bphy_3226TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bxe:Bxe_A1949 Mn2+/Fe2+ transporters, NRAMP family, MntH. (473 aa)
Bphy_3191PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B2476 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (490 aa)
Bphy_3138PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B1295 Na+/monocarboxylate symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (492 aa)
atpB-2ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (283 aa)
atpE-2ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (89 aa)
atpF-2ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (156 aa)
atpHATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (179 aa)
atpA-2ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (513 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (295 aa)
atpD-2ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (464 aa)
atpC-2ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (141 aa)
Bphy_2977KEGG: bxe:Bxe_A0116 chemotaxis protein MotA. (286 aa)
Bphy_2976PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A0117 outer membrane porin, OmpA/MotB family. (369 aa)
Bphy_2934ATPase, FliI/YscN family; KEGG: bxe:Bxe_A0163 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (547 aa)
Bphy_2743Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (205 aa)
Bphy_2742Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (460 aa)
kdpAPotassium-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (601 aa)
kdpBK+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (694 aa)
kdpCPotassium-transporting ATPase, C subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. (193 aa)
Bphy_1956KEGG: bxe:Bxe_A3151 hypothetical protein. (111 aa)
Bphy_1955PFAM: iron permease FTR1; KEGG: bxe:Bxe_A3150 oxidase-dependent Fe2+ transporter, (OFeT)family, FTR1-like. (281 aa)
Bphy_1761PFAM: Rh family protein/ammonium transporter; KEGG: bxe:Bxe_A2869 ammonium transporter. (400 aa)
Bphy_1618PFAM: cytochrome c oxidase subunit II; KEGG: bpd:BURPS668_2257 putative cytochrome c oxidase subunit. (125 aa)
Bphy_1494PFAM: protein of unknown function DUF1211; KEGG: bxe:Bxe_A1498 hypothetical protein. (191 aa)
kupK potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. (628 aa)
Bphy_1280TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bxe:Bxe_A1949 Mn2+/Fe2+ transporters, NRAMP family, MntH. (448 aa)
corAMagnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. (325 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (489 aa)
atpCAlternate F1F0 ATPase, F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (143 aa)
Bphy_3969KEGG: bxe:Bxe_B1636 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (668 aa)
Bphy_3970TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_B1635 CyoC. (201 aa)
Bphy_4091PFAM: protein of unknown function DUF1452; KEGG: pol:Bpro_2306 protein of unknown function DUF1452. (142 aa)
Bphy_4204PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B2791 outer membrane protein, OmpA/MotB family. (327 aa)
Bphy_4205PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_B2790 flagellar motor component-like. (289 aa)
Bphy_4316Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3665 heavy metal translocating P-type ATPase. (835 aa)
mntHMn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (442 aa)
Bphy_4721KEGG: bps:BPSL0295 putative natural resistance-associated macrophage protein. (547 aa)
kup-2K potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. (640 aa)
Bphy_4758TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: azc:AZC_2290 putative Na+/phosphate symporter. (601 aa)
Bphy_4793TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_C0168 putative cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (874 aa)
Bphy_4800PFAM: protein of unknown function DUF1452; KEGG: bxe:Bxe_B2012 hypothetical protein. (175 aa)
Bphy_5256KEGG: bam:Bamb_4086 natural resistance-associated macrophage protein. (409 aa)
Bphy_5257PFAM: natural resistance-associated macrophage protein; KEGG: bvi:Bcep1808_5219 natural resistance-associated macrophage protein. (432 aa)
Bphy_5265PFAM: protein of unknown function DUF125 transmembrane; KEGG: bxe:Bxe_B1618 hypothetical protein. (374 aa)
Bphy_5383PFAM: Mg2 transporter protein CorA family protein; KEGG: bxe:Bxe_B2765 Mg2+ transporter protein, CorA-like. (361 aa)
Bphy_5489PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_A2185 putative cytochrome c oxidase, subunit III. (208 aa)
Bphy_5490Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (669 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (231 aa)
atpEATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (81 aa)
atpFH+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (247 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (525 aa)
Bphy_1121PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: bxe:Bxe_A1886 H+-transporting two-sector ATPase, gamma subunit. (293 aa)
Bphy_1119PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: bxe:Bxe_A1866 putative K+ ion channel. (279 aa)
Bphy_0688PFAM: protein of unknown function UPF0016; KEGG: bxe:Bxe_A0925 hypothetical protein. (190 aa)
Bphy_0486PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0716 ABC Mn2+/Zn2+ transporter, ATPase subunit. (309 aa)
Bphy_0348PFAM: cytochrome c oxidase subunit II; KEGG: bxe:Bxe_A4077 putative cytochrome c oxidase subunit II. (190 aa)
Bphy_0347PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_A4078 putative cytochrome c oxidase, subunit I. (541 aa)
Bphy_0281PFAM: cytochrome c oxidase subunit III; KEGG: bte:BTH_I0430 cytochrome c oxidase subunit III. (285 aa)
Bphy_0277Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (537 aa)
Bphy_0276Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (557 aa)
Bphy_0257TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bxe:Bxe_A4189 ammonium transporter. (501 aa)
Bphy_0218TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: bxe:Bxe_A4205 Na+/phosphate symporter. (562 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.