STRINGSTRING
Bphy_5094 Bphy_5094 phnW-2 phnW-2 Bphy_5062 Bphy_5062 Bphy_5055 Bphy_5055 Bphy_5046 Bphy_5046 Bphy_5044 Bphy_5044 Bphy_5033 Bphy_5033 Bphy_5004 Bphy_5004 Bphy_4945 Bphy_4945 Bphy_4940 Bphy_4940 Bphy_4884 Bphy_4884 Bphy_4842 Bphy_4842 Bphy_4831 Bphy_4831 Bphy_4830 Bphy_4830 Bphy_4829 Bphy_4829 Bphy_4828 Bphy_4828 Bphy_4827 Bphy_4827 Bphy_4824 Bphy_4824 Bphy_4807 Bphy_4807 Bphy_4757 Bphy_4757 Bphy_4727 Bphy_4727 Bphy_4694 Bphy_4694 Bphy_4681 Bphy_4681 Bphy_4680 Bphy_4680 Bphy_4650 Bphy_4650 Bphy_4649 Bphy_4649 Bphy_4633 Bphy_4633 Bphy_4628 Bphy_4628 Bphy_4610 Bphy_4610 Bphy_4606 Bphy_4606 Bphy_4579 Bphy_4579 Bphy_4563 Bphy_4563 Bphy_4547 Bphy_4547 Bphy_4525 Bphy_4525 Bphy_4448 Bphy_4448 Bphy_4432 Bphy_4432 purF purF truA truA Bphy_4365 Bphy_4365 prpB prpB Bphy_4294 Bphy_4294 Bphy_4268 Bphy_4268 Bphy_4253 Bphy_4253 Bphy_4250 Bphy_4250 Bphy_4249 Bphy_4249 Bphy_4245 Bphy_4245 Bphy_4189 Bphy_4189 Bphy_4186 Bphy_4186 Bphy_4177 Bphy_4177 Bphy_4168 Bphy_4168 Bphy_4158 Bphy_4158 Bphy_4145 Bphy_4145 Bphy_4138 Bphy_4138 Bphy_4135 Bphy_4135 Bphy_4107 Bphy_4107 Bphy_4072 Bphy_4072 Bphy_3983 Bphy_3983 Bphy_3938 Bphy_3938 Bphy_3934 Bphy_3934 Bphy_3903 Bphy_3903 Bphy_3864 Bphy_3864 Bphy_3863 Bphy_3863 Bphy_3822 Bphy_3822 phnW phnW Bphy_3784 Bphy_3784 Bphy_3783 Bphy_3783 Bphy_3769 Bphy_3769 Bphy_3760 Bphy_3760 Bphy_3759 Bphy_3759 Bphy_3717 Bphy_3717 Bphy_3696 Bphy_3696 Bphy_3683 Bphy_3683 frc-2 frc-2 frc frc Bphy_3613 Bphy_3613 Bphy_3598 Bphy_3598 Bphy_3563 Bphy_3563 Bphy_3562 Bphy_3562 Bphy_3553 Bphy_3553 Bphy_3550 Bphy_3550 Bphy_3531 Bphy_3531 Bphy_3524 Bphy_3524 Bphy_3431 Bphy_3431 Bphy_3353 Bphy_3353 Bphy_3343 Bphy_3343 Bphy_3302 Bphy_3302 Bphy_3298 Bphy_3298 Bphy_3282 Bphy_3282 Bphy_3277 Bphy_3277 Bphy_3233 Bphy_3233 Bphy_3174 Bphy_3174 Bphy_3161 Bphy_3161 Bphy_3152 Bphy_3152 Bphy_3151 Bphy_3151 Bphy_3087 Bphy_3087 Bphy_3053 Bphy_3053 gcvT gcvT Bphy_2924 Bphy_2924 Bphy_2895 Bphy_2895 argC argC nusG nusG Bphy_2788 Bphy_2788 ubiX ubiX hemA hemA Bphy_2715 Bphy_2715 ychF ychF Bphy_2687 Bphy_2687 Bphy_2641 Bphy_2641 Bphy_2611 Bphy_2611 alc-2 alc-2 Bphy_2546 Bphy_2546 Bphy_2508 Bphy_2508 hemH hemH Bphy_5080 Bphy_5080 Bphy_2498 Bphy_2498 Bphy_2493 Bphy_2493 Bphy_2492 Bphy_2492 Bphy_2439 Bphy_2439 Bphy_2438 Bphy_2438 Bphy_2424 Bphy_2424 Bphy_2422 Bphy_2422 Bphy_2418 Bphy_2418 Bphy_2384 Bphy_2384 Bphy_2362 Bphy_2362 Bphy_2347 Bphy_2347 Bphy_2346 Bphy_2346 Bphy_2326 Bphy_2326 Bphy_2303 Bphy_2303 Bphy_2228 Bphy_2228 Bphy_2162 Bphy_2162 Bphy_2110 Bphy_2110 Bphy_2101 Bphy_2101 nth nth Bphy_2095 Bphy_2095 nadD nadD purD purD Bphy_2046 Bphy_2046 Bphy_1992 Bphy_1992 Bphy_1991 Bphy_1991 Bphy_1988 Bphy_1988 Bphy_1987 Bphy_1987 Bphy_1986 Bphy_1986 Bphy_1960 Bphy_1960 Bphy_1949 Bphy_1949 Bphy_1855 Bphy_1855 Bphy_1825 Bphy_1825 Bphy_1793 Bphy_1793 nusA nusA Bphy_1700 Bphy_1700 Bphy_1661 Bphy_1661 Bphy_1614 Bphy_1614 Bphy_1572 Bphy_1572 Bphy_1570 Bphy_1570 Bphy_1567 Bphy_1567 Bphy_1566 Bphy_1566 Bphy_1547 Bphy_1547 Bphy_1536 Bphy_1536 argA argA Bphy_1460 Bphy_1460 iscS iscS Bphy_1425 Bphy_1425 Bphy_1403 Bphy_1403 Bphy_1389 Bphy_1389 Bphy_1378 Bphy_1378 Bphy_1366 Bphy_1366 Bphy_1356 Bphy_1356 Bphy_1321 Bphy_1321 tadA tadA Bphy_1300 Bphy_1300 Bphy_1299 Bphy_1299 alc alc Bphy_1264 Bphy_1264 Bphy_1191 Bphy_1191 Bphy_1130 Bphy_1130 Bphy_1110 Bphy_1110 Bphy_1105 Bphy_1105 Bphy_1103 Bphy_1103 Bphy_1099 Bphy_1099 Bphy_1097 Bphy_1097 Bphy_1059 Bphy_1059 Bphy_1046 Bphy_1046 Bphy_1040 Bphy_1040 Bphy_1039 Bphy_1039 selO selO Bphy_1024 Bphy_1024 Bphy_0994 Bphy_0994 Bphy_0954 Bphy_0954 dnaQ dnaQ Bphy_0854 Bphy_0854 Bphy_0830 Bphy_0830 Bphy_0813 Bphy_0813 Bphy_0794 Bphy_0794 Bphy_0764 Bphy_0764 Bphy_0763 Bphy_0763 Bphy_0762 Bphy_0762 Bphy_0713 Bphy_0713 Bphy_0708 Bphy_0708 Bphy_0688 Bphy_0688 Bphy_0684 Bphy_0684 Bphy_0683 Bphy_0683 Bphy_0638 Bphy_0638 Bphy_0579 Bphy_0579 Bphy_0575 Bphy_0575 Bphy_0551 Bphy_0551 Bphy_0549 Bphy_0549 Bphy_0534 Bphy_0534 Bphy_0522 Bphy_0522 Bphy_0517 Bphy_0517 Bphy_0505 Bphy_0505 Bphy_0467 Bphy_0467 Bphy_0447 Bphy_0447 Bphy_0416 Bphy_0416 ybeY ybeY Bphy_0403 Bphy_0403 Bphy_0393 Bphy_0393 Bphy_0392 Bphy_0392 Bphy_0385 Bphy_0385 ilvA ilvA ispE ispE Bphy_0307 Bphy_0307 Bphy_0306 Bphy_0306 Bphy_0291 Bphy_0291 Bphy_0285 Bphy_0285 Bphy_0283 Bphy_0283 Bphy_0279 Bphy_0279 Bphy_0240 Bphy_0240 Bphy_0196 Bphy_0196 Bphy_0176 Bphy_0176 bioB bioB Bphy_0165 Bphy_0165 Bphy_0132 Bphy_0132 Bphy_0117 Bphy_0117 Bphy_0110 Bphy_0110 Bphy_0094 Bphy_0094 Bphy_0092 Bphy_0092 argB argB Bphy_0058 Bphy_0058 Bphy_0045 Bphy_0045 Bphy_0028 Bphy_0028 Bphy_0015 Bphy_0015 Bphy_5528 Bphy_5528 Bphy_5473 Bphy_5473 Bphy_5467 Bphy_5467 Bphy_5464 Bphy_5464 Bphy_5448 Bphy_5448 Bphy_5424 Bphy_5424 Bphy_5420 Bphy_5420 Bphy_5419 Bphy_5419 Bphy_5416 Bphy_5416 Bphy_5410 Bphy_5410 Bphy_5346 Bphy_5346 Bphy_5327 Bphy_5327 Bphy_5309 Bphy_5309 Bphy_5297 Bphy_5297 Bphy_5291 Bphy_5291 Bphy_5274 Bphy_5274 Bphy_5265 Bphy_5265 Bphy_5262 Bphy_5262 Bphy_5261 Bphy_5261 Bphy_5251 Bphy_5251 Bphy_5228 Bphy_5228 Bphy_5224 Bphy_5224 Bphy_5216 Bphy_5216 Bphy_5188 Bphy_5188 Bphy_5165 Bphy_5165 Bphy_5156 Bphy_5156 Bphy_5149 Bphy_5149 Bphy_5148 Bphy_5148 Bphy_5134 Bphy_5134 Bphy_5126 Bphy_5126 Bphy_5077 Bphy_5077
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_5094PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bja:blr5799 hypothetical protein. (225 aa)
phnW-22-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (370 aa)
Bphy_5062PFAM: ABC-1 domain protein; KEGG: bxe:Bxe_B1986 hypothetical protein. (518 aa)
Bphy_5055PFAM: peptidase S10 serine carboxypeptidase; KEGG: bxe:Bxe_B1993 carboxypeptidase. (554 aa)
Bphy_5046PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B3038 aminoglycoside phosphotransferase. (342 aa)
Bphy_5044PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_5081 acyl-CoA dehydrogenase domain protein. (416 aa)
Bphy_5033Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bch:Bcen2424_6244 cytochrome c biogenesis protein, transmembrane region. (581 aa)
Bphy_5004PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A6106 uracil-DNA glycosylase superfamily. (179 aa)
Bphy_4945PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2583 putative CaiB/BaiF family protein; Belongs to the CoA-transferase III family. (392 aa)
Bphy_4940PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C6651 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)
Bphy_4884PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rpa:RPA2425 putative lipase/esterase. (289 aa)
Bphy_4842PFAM: Amidase; KEGG: vei:Veis_0311 amidase; Belongs to the amidase family. (476 aa)
Bphy_4831PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: lbl:LBL_0679 electron transfer flavoprotein, alpha subunit. (325 aa)
Bphy_4830PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dsy:DSY3372 hypothetical protein. (263 aa)
Bphy_4829PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit. (249 aa)
Bphy_4828PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bmn:BMA10247_0219 electron transfer flavoprotein, alpha subunit. (312 aa)
Bphy_4827Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (555 aa)
Bphy_4824PFAM: regulatory protein TetR; KEGG: tfu:Tfu_2799 TetR/AcrR family transcriptional regulator. (228 aa)
Bphy_4807PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B2019 putative acetyltransferase. (182 aa)
Bphy_4757KEGG: bxe:Bxe_B0005 hypothetical protein. (395 aa)
Bphy_4727PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2226 xanthine dehydrogenase. (737 aa)
Bphy_4694TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2267 acyl-CoA transferase. (415 aa)
Bphy_4681KEGG: bxe:Bxe_B1314 putative exonuclease involved in mRNA processing. (350 aa)
Bphy_4680PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bxe:Bxe_B1315 DNA ligase (ATP). (561 aa)
Bphy_4650PFAM: heat shock protein Hsp20; KEGG: bpd:BURPS668_1441 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (145 aa)
Bphy_4649PFAM: heat shock protein Hsp20; KEGG: bam:Bamb_6389 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (137 aa)
Bphy_4633PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_B0848 putative carboxylesterase. (284 aa)
Bphy_4628TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bxe:Bxe_B0843 heavy metal/H+ antiporter, CDF family. (308 aa)
Bphy_4610KEGG: bxe:Bxe_B0554 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein. (414 aa)
Bphy_4606PFAM: Pirin domain protein; KEGG: xau:Xaut_1024 pirin domain protein; Belongs to the pirin family. (237 aa)
Bphy_4579KEGG: sus:Acid_7532 hypothetical protein. (292 aa)
Bphy_4563PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_6054 GCN5-related N-acetyltransferase. (187 aa)
Bphy_4547PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B1053 CutL; carbon monoxide dehydrogenase large chain. (802 aa)
Bphy_4525PFAM: Cupin 2 conserved barrel domain protein; KEGG: rme:Rmet_5084 cupin 2, conserved barrel. (147 aa)
Bphy_4448PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B0613 putative short-chain dehydrogenase. (201 aa)
Bphy_4432PFAM: protein of unknown function DUF323; KEGG: bxe:Bxe_B0605 hypothetical protein. (430 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (516 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (267 aa)
Bphy_4365PFAM: protein of unknown function DUF339; KEGG: bxe:Bxe_B2891 hypothetical protein. (90 aa)
prpBMethylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (303 aa)
Bphy_42945-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_B2956 fumarylacetoacetate hydrolase family protein. (282 aa)
Bphy_4268methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (178 aa)
Bphy_4253Serine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: bxe:Bxe_B3001 serine--glyoxylate transaminase. (406 aa)
Bphy_4250PFAM: pyruvate carboxyltransferase; KEGG: pfo:Pfl_1315 pyruvate carboxyltransferase. (315 aa)
Bphy_4249PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pfo:Pfl_1314 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (397 aa)
Bphy_4245PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B3005 putative short-chain dehydrogenase. (249 aa)
Bphy_4189PFAM: selenium-binding protein; KEGG: reu:Reut_B5039 56kDa selenium binding. (464 aa)
Bphy_4186PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bxe:Bxe_A1491 putative cytidine/deoxycytidylate deaminase family protein. (180 aa)
Bphy_4177PFAM: Ankyrin; KEGG: bxe:Bxe_B1343 ankyrin domain protein. (175 aa)
Bphy_4168PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bxe:Bxe_B0403 hypothetical protein. (133 aa)
Bphy_4158Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B3022 transcriptional regulator, XRE family. (204 aa)
Bphy_4145KEGG: bxe:Bxe_B0005 hypothetical protein. (369 aa)
Bphy_4138TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0011 hypothetical protein. (425 aa)
Bphy_4135PFAM: thioesterase superfamily protein; KEGG: pst:PSPTO_5067 4-hydroxybenzoyl-CoA thioesterase domain protein. (160 aa)
Bphy_4107KEGG: bxe:Bxe_A3010 putative glutathione S-transferase domain protein. (326 aa)
Bphy_4072PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0278 putative acyl-CoA dehydrogenase. (401 aa)
Bphy_3983PFAM: protein of unknown function UPF0047; KEGG: bxe:Bxe_B1335 protein of unknown function UPF0047. (139 aa)
Bphy_3938PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 putative acyl-CoA dehydrogenase. (600 aa)
Bphy_3934PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 putative acyl-CoA dehydrogenase. (596 aa)
Bphy_3903PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B1210 hypothetical protein; Belongs to the pirin family. (241 aa)
Bphy_3864TIGRFAM: ectoine utilization protein EutB; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_C0056 putative threonine dehydratase. (330 aa)
Bphy_3863Ectoine utilization protein EutC; KEGG: bxe:Bxe_C0057 ornithine cyclodeaminase; TIGRFAM: ectoine utilization protein EutC; PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase. (333 aa)
Bphy_3822TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bxe:Bxe_B2235 PepM. (568 aa)
phnW2-aminoethylphosphonate aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (363 aa)
Bphy_3784Hypothetical protein; KEGG: bch:Bcen2424_3568 ornithine cyclodeaminase. (101 aa)
Bphy_3783PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bam:Bamb_3882 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (323 aa)
Bphy_3769Amidohydrolase; KEGG: bur:Bcep18194_B0252 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (396 aa)
Bphy_3760PFAM: dehydrogenase E1 component; KEGG: bxe:Bxe_B0313 pyruvate dehydrogenase (lipoamide). (327 aa)
Bphy_3759PFAM: Transketolase central region; Transketolase domain protein; KEGG: bxe:Bxe_B0314 acetoin dehydrogenase, beta subunit. (334 aa)
Bphy_3717PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; KEGG: bxe:Bxe_A2188 putative phosphohydrolase, MutT/NUDIX. (319 aa)
Bphy_3696PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sde:Sde_3214 hypothetical protein. (296 aa)
Bphy_3683PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_3642 probable acyl-CoA dehydrogenase. (384 aa)
frc-2formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. (416 aa)
frcformyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. (415 aa)
Bphy_3613PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. (265 aa)
Bphy_3598PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0886 transcriptional regulator, TetR family. (227 aa)
Bphy_3563PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0959 transcriptional regulator, TetR family. (254 aa)
Bphy_3562PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0960 isovaleryl-CoA dehydrogenase. (393 aa)
Bphy_3553PFAM: Cupin 2 conserved barrel domain protein; KEGG: reu:Reut_C6134 cupin region. (147 aa)
Bphy_3550PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_C6137 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR. (240 aa)
Bphy_3531PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bch:Bcen2424_5776 fumarylacetoacetate (FAA) hydrolase. (318 aa)
Bphy_3524PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A1969 transcriptional regulator, TetR family. (187 aa)
Bphy_3431PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_A3938 ornithine cyclodeaminase/mu-crystallin. (321 aa)
Bphy_3353PFAM: Glutathione S-transferase domain; KEGG: bja:bll8133 glutathione S-transferase; Belongs to the GST superfamily. (208 aa)
Bphy_3343PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_B1765 ornithine cyclodeaminase/Mu-crystallin family protein. (305 aa)
Bphy_3302PFAM: peptidase M19 renal dipeptidase; KEGG: bxe:Bxe_B1584 membrane dipeptidase. (323 aa)
Bphy_3298PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bam:Bamb_4492 electron transfer flavoprotein, alpha subunit. (392 aa)
Bphy_3282PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_B0824 putative lipase (esterase). (311 aa)
Bphy_3277PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pfo:Pfl_3845 protein tyrosine phosphatase. (145 aa)
Bphy_3233PFAM: regulatory protein TetR; KEGG: bja:blr6905 probable transcriptional regulator. (193 aa)
Bphy_3174L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pde:Pden_5045 (S)-2-hydroxy-acid oxidase. (399 aa)
Bphy_3161PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; Belongs to the GcvT family. (827 aa)
Bphy_3152Cobaltochelatase, CobN subunit; KEGG: bxe:Bxe_B1646 putative cobalamin biosynthesis-related protein; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase. (1267 aa)
Bphy_3151KEGG: bxe:Bxe_B1645 putative magnesium chelatase, ChlI subunit; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (342 aa)
Bphy_3087PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: bte:BTH_I0086 DNA-3-methyladenine glycosylase II. (307 aa)
Bphy_3053PFAM: adenylate cyclase; KEGG: bxe:Bxe_A0013 putative adenylate cyclase. (176 aa)
gcvTGlycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. (372 aa)
Bphy_2924PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A0173 acyl-CoA dehydrogenase. (557 aa)
Bphy_2895PFAM: protein of unknown function DUF185; KEGG: bxe:Bxe_A0203 hypothetical protein. (397 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. (315 aa)
nusGNusG antitermination factor; Participates in transcription elongation, termination and antitermination. (185 aa)
Bphy_2788PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bxe:Bxe_A0365 glutamate synthase (ferredoxin). (1567 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (202 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (429 aa)
Bphy_2715TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A0441 putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase). (207 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa)
Bphy_2687TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bxe:Bxe_A0472 putative hippurate carboxypeptidase, M20D-type. (397 aa)
Bphy_2641KEGG: bxe:Bxe_A0518 hypothetical protein. (104 aa)
Bphy_2611PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_A0550 putative regucalcin family protein. (309 aa)
alc-2TIGRFAM: allantoicase; PFAM: Allantoicase region; KEGG: bxe:Bxe_A0569 allantoicase; Belongs to the allantoicase family. (336 aa)
Bphy_2546PFAM: ferredoxin-dependent glutamate synthase; KEGG: bxe:Bxe_A4011 glutamate synthase (NADPH); Belongs to the glutamate synthase family. (537 aa)
Bphy_2508PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_A3971 putative carbon-nitrogen hydrolase protein. (282 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (356 aa)
Bphy_5080PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1852 oxidoreductase, 2OG-Fe(II) oxygenase family. (196 aa)
Bphy_2498KEGG: bxe:Bxe_A3962 putative thioredoxin protein. (143 aa)
Bphy_2493PFAM: deoxynucleoside kinase; KEGG: bxe:Bxe_A3957 putative deoxynucleoside kinase. (231 aa)
Bphy_2492KEGG: bxe:Bxe_A3956 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK. (196 aa)
Bphy_2439Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A3905 peroxidase. (212 aa)
Bphy_2438PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A3906 acyl-CoA dehydrogenase-like. (396 aa)
Bphy_2424PFAM: aminotransferase class V; KEGG: bcn:Bcen_0344 aminotransferase, class V. (406 aa)
Bphy_2422TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A3886 putative xanthine dehydrogenase. (505 aa)
Bphy_2418PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_A3882 putative isomerase. (214 aa)
Bphy_2384PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bam:Bamb_4298 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (832 aa)
Bphy_23625-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bur:Bcep18194_B2574 5-oxoprolinase (ATP-hydrolyzing). (1211 aa)
Bphy_2347PFAM: regulatory protein TetR; KEGG: mlo:mlr1953 probable transcriptional regulator. (194 aa)
Bphy_2346PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2319 putative short-chain dehydrogenase/reductase SDR. (257 aa)
Bphy_2326Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (151 aa)
Bphy_2303KEGG: cbe:Cbei_2593 hypothetical protein. (307 aa)
Bphy_2228PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bam:Bamb_2518 cobalamin (vitamin B12) biosynthesis CbiX protein. (126 aa)
Bphy_2162PFAM: Pirin domain protein; KEGG: bxe:Bxe_A3389 hypothetical protein; Belongs to the pirin family. (235 aa)
Bphy_2110KEGG: bxe:Bxe_A3324 hypothetical protein. (157 aa)
Bphy_2101PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A3315 putative ATPase, AAA family protein. (280 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (214 aa)
Bphy_2095PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A3309 transcriptional regulator, TetR family. (210 aa)
nadDNicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (253 aa)
purDPhosphoribosylamine--glycine ligase; KEGG: bxe:Bxe_A3260 phosphoribosylglycinamide synthetase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; Belongs to the GARS family. (425 aa)
Bphy_2046PFAM: LemA family protein; KEGG: bte:BTH_I0284 LemA family protein. (220 aa)
Bphy_1992PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A3192 putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like. (398 aa)
Bphy_1991PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3191 putative pimeloyl-CoA dehydrogenase (small subunit), PimD-like. (375 aa)
Bphy_1988PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A5556 glutathione S-transferase-like; Belongs to the GST superfamily. (233 aa)
Bphy_1987PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3188 putative acyl-CoA dehydrogenase oxidoreductase. (412 aa)
Bphy_1986PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A3187 putative tyrosine protein kinase/aminoglycoside phosphotransferase. (368 aa)
Bphy_1960PFAM: Patatin; KEGG: bxe:Bxe_A3155 putative transmembrane protein, patatin-like phospholipase domain. (417 aa)
Bphy_1949PFAM: Pirin domain protein; KEGG: bxe:Bxe_A3144 putative chromosome condensation pirin-like protein; Belongs to the pirin family. (290 aa)
Bphy_1855PFAM: ATP dependent DNA ligase; KEGG: afw:Anae109_0939 DNA ligase D. (205 aa)
Bphy_1825Amidohydrolase; KEGG: bxe:Bxe_A2955 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (387 aa)
Bphy_1793PFAM: Patatin; KEGG: bxe:Bxe_A2928 putative patatin-like phospholipase. (343 aa)
nusANusA antitermination factor; Participates in both transcription termination and antitermination. (491 aa)
Bphy_1700PFAM: acyl-CoA dehydrogenase domain protein; Protein of unknown function DUF1974; KEGG: bxe:Bxe_A2774 putative transmembrane acyl-CoA dehydrogenase. (889 aa)
Bphy_1661PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A2504 putative ADP-ribose pyrophosphatase, NUDIX hydrolase, NudF; Belongs to the Nudix hydrolase family. (181 aa)
Bphy_1614PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1310 alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family. (406 aa)
Bphy_1572KEGG: bxe:Bxe_A1357 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (444 aa)
Bphy_1570PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1359 bifunctional - major facilitator superfamily (MFS) lysophospholipid exporter/2-acylglycerolphosphoethanolamine acyltransferase. (645 aa)
Bphy_1567Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (557 aa)
Bphy_1566PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1363 putative short chain dehydrogenase. (258 aa)
Bphy_1547PFAM: Glutathione S-transferase domain; KEGG: bch:Bcen2424_1682 glutathione S-transferase, N-terminal domain; Belongs to the GST superfamily. (234 aa)
Bphy_1536KEGG: bxe:Bxe_A1427 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20. (425 aa)
argAKEGG: bxe:Bxe_A1512 amino-acid N-acetyltransferase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; Belongs to the acetyltransferase family. ArgA subfamily. (459 aa)
Bphy_1460PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_A1551 protein tyrosine phosphatase. (175 aa)
iscSCysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. (407 aa)
Bphy_1425PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_A1587 putative metallo-beta-lactamase family protein. (257 aa)
Bphy_1403SMART: helicase c2; KEGG: bxe:Bxe_A1612 putative ATP-dependent helicase. (757 aa)
Bphy_1389PFAM: HhH-GPD family protein; KEGG: bxe:Bxe_A1627 HhH-GPD superfamily base excision DNA repair protein. (340 aa)
Bphy_1378PFAM: Patatin; KEGG: bxe:Bxe_A1641 putative exported phospholipase. (358 aa)
Bphy_1366PFAM: acyl-coA-binding protein ACBP; KEGG: bpd:BURPS668_2466 acyl-CoA-binding protein. (89 aa)
Bphy_1356PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1663 alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family. (362 aa)
Bphy_1321Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (801 aa)
tadACMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (213 aa)
Bphy_1300Urate catabolism protein; KEGG: bxe:Bxe_A1926 putative polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase. (317 aa)
Bphy_1299KEGG: bam:Bamb_1950 hypothetical protein. (173 aa)
alcAllantoicase; KEGG: bxe:Bxe_A1928 allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase region; Belongs to the allantoicase family. (337 aa)
Bphy_1264PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A1969 transcriptional regulator, TetR family. (206 aa)
Bphy_1191PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bur:Bcep18194_A4872 glutathione-dependent formaldehyde-activating, GFA. (123 aa)
Bphy_1130PFAM: LemA family protein; KEGG: bvi:Bcep1808_7283 LemA family protein. (204 aa)
Bphy_1110PFAM: heat shock protein Hsp20; KEGG: bvi:Bcep1808_6352 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (145 aa)
Bphy_1105PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bvi:Bcep1808_6325 beta-lactamase domain protein. (454 aa)
Bphy_1103KEGG: bpl:BURPS1106A_A1467 putative cation-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein. (822 aa)
Bphy_1099Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (814 aa)
Bphy_1097TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bxe:Bxe_B2642 magnesium-translocating P-type ATPase. (890 aa)
Bphy_1059PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_A2244 putative low molecular weight protein-tyrosine-phosphatase, EpsP. (153 aa)
Bphy_1046PFAM: Ankyrin; KEGG: bxe:Bxe_A2259 putative ankyrin repeat harboring signal peptide protein. (257 aa)
Bphy_1040PFAM: protein of unknown function DUF833; KEGG: bxe:Bxe_A2266 putative signal peptide protein. (273 aa)
Bphy_1039PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_A2267 putative esterase/lipase. (319 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (505 aa)
Bphy_1024PFAM: BolA family protein; KEGG: bxe:Bxe_A2279 putative stress-induced morphogene BolA-like protein; Belongs to the BolA/IbaG family. (104 aa)
Bphy_0994PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_A2315 putative amino-acid dehydratase. (340 aa)
Bphy_0954PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A2358 conserved hypothetical protein, transmembrane, CaiB/BaiF family; Belongs to the CoA-transferase III family. (421 aa)
dnaQDNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (249 aa)
Bphy_0854PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1237 putative acetyltransferase, GNAT family. (166 aa)
Bphy_08303-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)
Bphy_0813PFAM: GCN5-related N-acetyltransferase; KEGG: bcn:Bcen_0626 GCN5-related N-acetyltransferase. (162 aa)
Bphy_0794PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A1037 long-chain acyl-CoA thioester hydrolase. (168 aa)
Bphy_0764PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 putative acyl-CoA dehydrogenase. (596 aa)
Bphy_0763PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bcn:Bcen_0584 electron transfer flavoprotein, alpha subunit. (311 aa)
Bphy_0762PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit. (249 aa)
Bphy_0713TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A0950 xanthine dehydrogenase, subunit A. (512 aa)
Bphy_0708PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bxe:Bxe_A0945 putative oxidoreductase. (416 aa)
Bphy_0688PFAM: protein of unknown function UPF0016; KEGG: bxe:Bxe_A0925 hypothetical protein. (190 aa)
Bphy_0684PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reh:H16_B0975 acyl-CoA dehydrogenase. (379 aa)
Bphy_0683Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B0974 predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family. (416 aa)
Bphy_0638TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bxe:Bxe_A3438 putative agmatinase; Belongs to the arginase family. (330 aa)
Bphy_0579PFAM: fatty acid desaturase; KEGG: bxe:Bxe_A0812 putative transmembrane fatty acid desaturase. (400 aa)
Bphy_0575TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: FAD synthetase; Riboflavin kinase; KEGG: bxe:Bxe_A0808 riboflavin kinase / FAD synthetase; Belongs to the ribF family. (330 aa)
Bphy_0551PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A0782 putative CoA transferase family protein; Belongs to the CoA-transferase III family. (464 aa)
Bphy_0549KEGG: bpl:BURPS1106A_0947 hypothetical protein. (103 aa)
Bphy_0534PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0762 3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
Bphy_0522TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bxe:Bxe_A0749 methylated-DNA-(protein)-cysteine S-methyltransferase. (156 aa)
Bphy_0517PFAM: Pirin domain protein; KEGG: bxe:Bxe_A0744 hypothetical protein; Belongs to the pirin family. (293 aa)
Bphy_0505PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I2430 oxidoreductase, short chain dehydrogenase/reductase family. (246 aa)
Bphy_0467KEGG: bxe:Bxe_A0697 hypothetical protein. (127 aa)
Bphy_0447KEGG: rme:Rmet_0253 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (Reverse transcriptase); HNH endonuclease; Group II intron maturase-specific domain protein; SMART: HNH nuclease. (568 aa)
Bphy_0416Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A0634 transcriptional regulator, XRE family. (229 aa)
ybeYProtein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (153 aa)
Bphy_0403PFAM: phospholipid/glycerol acyltransferase; KEGG: bxe:Bxe_A4015 putative acyltransferase. (252 aa)
Bphy_0393PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A4027 ABC transporter, fused ATPase and inner membrane subunits. (631 aa)
Bphy_0392PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A4028 putative thioesterase domain protein. (135 aa)
Bphy_0385PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_A6048 acyl-CoA dehydrogenase-like. (595 aa)
ilvAThreonine dehydratase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (507 aa)
ispE4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (293 aa)
Bphy_0307TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_A4141 maleylacetoacetate isomerase (HmgC). (214 aa)
Bphy_0306PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_A4142 putative fumarylacetoacetate (FAA) hydrolase. (232 aa)
Bphy_0291PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: bxe:Bxe_A4157 transcriptional regulator, MarR family with acetyltransferase activity. (307 aa)
Bphy_0285PFAM: cytochrome oxidase assembly; KEGG: bxe:Bxe_A4163 putative cytochrome oxidase assembly protein. (369 aa)
Bphy_0283KEGG: bxe:Bxe_A4165 hypothetical protein. (255 aa)
Bphy_0279PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bxe:Bxe_A4169 putative cytochrome c oxidase assembly protein. (203 aa)
Bphy_0240Helicase superfamily 1 and 2 ATP-binding; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: rpe:RPE_2167 DEAD/DEAH box helicase domain protein. (2097 aa)
Bphy_0196PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_A4235 putative fumarylacetoacetate (FAA) hydrolase. (330 aa)
Bphy_0176PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A4257 putative acyl-CoA dehydrogenase. (376 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (351 aa)
Bphy_0165PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A4270 putative hydroxymethylglutaryl-CoA lyase. (308 aa)
Bphy_0132Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sus:Acid_0530 putative anti-sigma regulatory factor, serine/threonine protein kinase. (382 aa)
Bphy_0117TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bxe:Bxe_A4320 cation (Co++/Zn++/Cd++) efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (400 aa)
Bphy_0110PFAM: Amidase; KEGG: bxe:Bxe_A4331 amidase; Belongs to the amidase family. (504 aa)
Bphy_0094PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_A4352 carbon-monoxide dehydrogenase form II, large subunit. (795 aa)
Bphy_0092PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A4354 putative ATPase. (296 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (299 aa)
Bphy_0058PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_A4392 hypothetical protein. (404 aa)
Bphy_0045TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bxe:Bxe_A4405 putative 6-pyruvoyl tetrahydropterin synthase. (148 aa)
Bphy_0028PFAM: Patatin; KEGG: bxe:Bxe_A4424 putative patatin-like phospholipase protein. (288 aa)
Bphy_0015PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bcn:Bcen_0256 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (280 aa)
Bphy_5528PFAM: Patatin; KEGG: bam:Bamb_4981 patatin. (417 aa)
Bphy_5473TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bxe:Bxe_A3833 Dyp-type peroxidase. (352 aa)
Bphy_5467PFAM: Amidase; KEGG: reu:Reut_A1658 amidase. (508 aa)
Bphy_5464PFAM: Domain of unknown function DUF1801; KEGG: bld:BLi02126 YdeI. (193 aa)
Bphy_5448PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dac:Daci_3585 pyridoxal-5'-phosphate-dependent protein beta subunit. (306 aa)
Bphy_5424Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bxe:Bxe_B0816 putative transmembrane protein. (604 aa)
Bphy_5420KEGG: bxe:Bxe_B2649 hypothetical protein. (381 aa)
Bphy_5419PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_6188 transcriptional regulator, TetR family. (211 aa)
Bphy_5416KEGG: bxe:Bxe_A2027 putative acyl-CoA dehydrogenase-related protein. (388 aa)
Bphy_5410KEGG: bxe:Bxe_B1167 hypothetical protein. (204 aa)
Bphy_5346PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2712 hypothetical protein. (171 aa)
Bphy_5327PFAM: Patatin; KEGG: reu:Reut_A0386 patatin. (418 aa)
Bphy_5309PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: bxe:Bxe_B1180 hypothetical protein. (756 aa)
Bphy_5297KEGG: bxe:Bxe_B1162 putative DNA topoisomerase, type I. (411 aa)
Bphy_5291PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_B1158 putative Na+/H+ antiporter, CPA1 family. (444 aa)
Bphy_5274PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bxe:Bxe_B1262 putative epoxide hydrolase. (383 aa)
Bphy_5265PFAM: protein of unknown function DUF125 transmembrane; KEGG: bxe:Bxe_B1618 hypothetical protein. (374 aa)
Bphy_5262PFAM: heat shock protein Hsp20; KEGG: bam:Bamb_6388 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (146 aa)
Bphy_5261PFAM: heat shock protein Hsp20; KEGG: bxe:Bxe_A2601 putative small heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (135 aa)
Bphy_5251PFAM: ABC transporter transmembrane region; response regulator receiver; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6441 response regulator receiver protein. (893 aa)
Bphy_5228Hypothetical protein; KEGG: pfl:PFL_1379 acyl-CoA dehydrogenase family protein. (124 aa)
Bphy_5224KEGG: rso:RSc1448 hypothetical protein. (278 aa)
Bphy_5216PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1235 putative exonuclease. (370 aa)
Bphy_5188PFAM: protein of unknown function DUF6 transmembrane; KEGG: rfr:Rfer_3237 protein of unknown function DUF6, transmembrane. (308 aa)
Bphy_5165PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_C6137 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR. (238 aa)
Bphy_5156L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: csa:Csal_1075 (S)-2-hydroxy-acid oxidase. (415 aa)
Bphy_5149PFAM: Acetamidase/Formamidase; KEGG: bxe:Bxe_B0603 predicted acetamidase/formamidase. (343 aa)
Bphy_5148PFAM: helix-turn-helix- domain containing protein AraC type; Acetamidase/Formamidase; KEGG: bxe:Bxe_B0602 transcriptional regulator, AraC family with acetamidase/formamidase activity. (791 aa)
Bphy_5134PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_C1225 putative xanthene dehydrogenase. (742 aa)
Bphy_5126PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1084 butyryl-CoA dehydrogenase. (377 aa)
Bphy_5077Succinate CoA transferase; KEGG: bxe:Bxe_B1860 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase. (504 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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