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Bphy_0480 Bphy_0480 Bphy_0649 Bphy_0649 Bphy_1121 Bphy_1121 atpA atpA atpF atpF atpE atpE atpB atpB atpC atpC atpD atpD Bphy_1267 Bphy_1267 Bphy_1582 Bphy_1582 Bphy_1724 Bphy_1724 Bphy_2409 Bphy_2409 Bphy_2934 Bphy_2934 atpC-2 atpC-2 atpD-2 atpD-2 atpG atpG atpA-2 atpA-2 atpH atpH atpF-2 atpF-2 atpE-2 atpE-2 atpB-2 atpB-2 Bphy_3034 Bphy_3034 Bphy_3082 Bphy_3082 Bphy_3360 Bphy_3360 Bphy_3486 Bphy_3486 Bphy_3490 Bphy_3490 Bphy_3507 Bphy_3507 Bphy_3537 Bphy_3537 Bphy_3549 Bphy_3549 Bphy_3838 Bphy_3838 Bphy_4022 Bphy_4022 Bphy_4326 Bphy_4326 Bphy_4496 Bphy_4496 Bphy_4636 Bphy_4636 Bphy_4998 Bphy_4998 Bphy_5459 Bphy_5459 Bphy_5505 Bphy_5505
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_0480TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A0710 RND efflux system, outer membrane lipoprotein, NodT subfamily. (505 aa)
Bphy_0649TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B1231 RND efflux system, outer membrane lipoprotein, NodT family. (496 aa)
Bphy_1121PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: bxe:Bxe_A1886 H+-transporting two-sector ATPase, gamma subunit. (293 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (525 aa)
atpFH+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (247 aa)
atpEATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (81 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (231 aa)
atpCAlternate F1F0 ATPase, F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (143 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (489 aa)
Bphy_1267TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1966 RND efflux system, outer membrane lipoprotein, NodT family. (497 aa)
Bphy_1582TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1346 aromatic acid efflux system, outer membrane lipoprotein. (515 aa)
Bphy_1724TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A2815 MFS efflux system, outer membrane lipoprotein, NodT family. (515 aa)
Bphy_2409TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gur:Gura_0526 RND efflux system, outer membrane lipoprotein, NodT family. (483 aa)
Bphy_2934ATPase, FliI/YscN family; KEGG: bxe:Bxe_A0163 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (547 aa)
atpC-2ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (141 aa)
atpD-2ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (464 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (295 aa)
atpA-2ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (513 aa)
atpHATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (179 aa)
atpF-2ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (156 aa)
atpE-2ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (89 aa)
atpB-2ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (283 aa)
Bphy_3034PFAM: ATP synthase I chain; KEGG: bxe:Bxe_A0033 putative ATP synthase protein I. (181 aa)
Bphy_3082TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A4489 RND efflux system, outer membrane lipoprotein, NodT family. (536 aa)
Bphy_3360TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5590 RND efflux system, outer membrane lipoprotein, NodT. (494 aa)
Bphy_3486TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1741 RND efflux system, outer membrane lipoprotein, NodT family. (500 aa)
Bphy_3490TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bte:BTH_I0682 RND efflux system, outer membrane lipoprotein, NodT family. (503 aa)
Bphy_3507TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pca:Pcar_0814 outer membrane protein. (490 aa)
Bphy_3537TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1966 RND efflux system, outer membrane lipoprotein, NodT family. (487 aa)
Bphy_3549TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6576 RND efflux system, outer membrane lipoprotein, NodT family. (486 aa)
Bphy_3838TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0471 ABC efflux system, outer membrane lipoprotein, NodT family. (503 aa)
Bphy_4022TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_C6204 RND efflux system, outer membrane lipoprotein, NodT. (502 aa)
Bphy_4326TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1747 RND efflux system, outer membrane lipoprotein, NodT family. (484 aa)
Bphy_4496TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0738 MFS multidrug efflux pump, outer membrane lipoprotein, NodT family. (484 aa)
Bphy_4636TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0851 RND efflux system, outer membrane lipoprotein, NodT family. (521 aa)
Bphy_4998TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_B4486 RND efflux system, outer membrane lipoprotein, NodT. (515 aa)
Bphy_5459TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_5470 transcriptional regulator, fis family. (493 aa)
Bphy_5505TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B1231 RND efflux system, outer membrane lipoprotein, NodT family. (496 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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