STRINGSTRING
Bphy_3491 Bphy_3491 Bphy_5504 Bphy_5504 Bphy_0648 Bphy_0648 Bphy_4635 Bphy_4635 Bphy_0479 Bphy_0479
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_3491TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A0709 RND family hydrophobe/amphiphile efflux pump. (1052 aa)
Bphy_5504TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B1230 hydrophobe/amphiphile efflux pump, RND family. (1089 aa)
Bphy_0648TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B1230 hydrophobe/amphiphile efflux pump, RND family. (1089 aa)
Bphy_4635TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B0850 hydrophobe/amphiphile efflux pump, RND family. (1061 aa)
Bphy_0479TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A0709 RND family hydrophobe/amphiphile efflux pump. (1064 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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