STRINGSTRING
Bphy_2127 Bphy_2127 Bphy_2330 Bphy_2330 Bphy_4843 Bphy_4843
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_2127PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bxe:Bxe_A3342 putative rubredoxin. (58 aa)
Bphy_2330PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bcn:Bcen_0380 rubredoxin-type Fe(Cys)4 protein. (56 aa)
Bphy_4843PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bte:BTH_I0937 rubredoxin-related protein; Belongs to the rubredoxin family. (76 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.