STRINGSTRING
Bphy_5489 Bphy_5489 Bphy_3970 Bphy_3970 Bphy_3647 Bphy_3647 Bphy_0281 Bphy_0281
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_5489PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_A2185 putative cytochrome c oxidase, subunit III. (208 aa)
Bphy_3970TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_B1635 CyoC. (201 aa)
Bphy_3647TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bps:BPSL2380 cytochrome o ubiquinol oxidase subunit III. (204 aa)
Bphy_0281PFAM: cytochrome c oxidase subunit III; KEGG: bte:BTH_I0430 cytochrome c oxidase subunit III. (285 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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