STRINGSTRING
Bphy_4008 Bphy_4008 Bphy_4040 Bphy_4040 Bphy_4044 Bphy_4044 Bphy_4055 Bphy_4055 Bphy_4151 Bphy_4151 araG-2 araG-2 Bphy_4226 Bphy_4226 Bphy_4279 Bphy_4279 prfC prfC Bphy_4301 Bphy_4301 potA-4 potA-4 Bphy_4328 Bphy_4328 Bphy_4346 Bphy_4346 Bphy_4403 Bphy_4403 Bphy_4444 Bphy_4444 Bphy_4463 Bphy_4463 Bphy_4464 Bphy_4464 Bphy_4501 Bphy_4501 Bphy_4502 Bphy_4502 Bphy_4523 Bphy_4523 Bphy_4526 Bphy_4526 Bphy_4528 Bphy_4528 Bphy_4555 Bphy_4555 Bphy_4588 Bphy_4588 phnC phnC Bphy_4658 Bphy_4658 Bphy_4685 Bphy_4685 Bphy_4748 Bphy_4748 Bphy_4752 Bphy_4752 Bphy_4783 Bphy_4783 Bphy_4797 Bphy_4797 recG recG Bphy_2505 Bphy_2505 Bphy_2493 Bphy_2493 Bphy_2489 Bphy_2489 miaA miaA Bphy_2472 Bphy_2472 potA-3 potA-3 Bphy_2367 Bphy_2367 Bphy_2353 Bphy_2353 xylG xylG cysC cysC Bphy_2313 Bphy_2313 Bphy_2302 Bphy_2302 ureG ureG Bphy_2255 Bphy_2255 Bphy_2254 Bphy_2254 Bphy_2244 Bphy_2244 Bphy_2231 Bphy_2231 Bphy_2211 Bphy_2211 Bphy_2204 Bphy_2204 cobQ cobQ Bphy_2199 Bphy_2199 Bphy_2189 Bphy_2189 Bphy_2166 Bphy_2166 Bphy_2155 Bphy_2155 Bphy_2152 Bphy_2152 Bphy_2148 Bphy_2148 Bphy_2125 Bphy_2125 Bphy_2101 Bphy_2101 Bphy_2089 Bphy_2089 Bphy_2082 Bphy_2082 msbA msbA Bphy_2054 Bphy_2054 Bphy_1972 Bphy_1972 uvrB uvrB Bphy_1789 Bphy_1789 recC recC recB recB recD recD infB infB Bphy_1722 Bphy_1722 Bphy_1718 Bphy_1718 Bphy_1689 Bphy_1689 ssuB ssuB nodI nodI cysA cysA Bphy_1605 Bphy_1605 Bphy_1604 Bphy_1604 Bphy_1599 Bphy_1599 Bphy_1590 Bphy_1590 Bphy_1549 Bphy_1549 aroK aroK Bphy_1529 Bphy_1529 Bphy_1504 Bphy_1504 Bphy_1488 Bphy_1488 ntrC ntrC lolD lolD pyrG pyrG der der hflX hflX purA purA Bphy_1403 Bphy_1403 mutS mutS Bphy_1380 Bphy_1380 Bphy_1367 Bphy_1367 radA radA Bphy_1355 Bphy_1355 smc smc Bphy_1291 Bphy_1291 Bphy_1285 Bphy_1285 potA-2 potA-2 Bphy_1242 Bphy_1242 Bphy_1236 Bphy_1236 Bphy_1229 Bphy_1229 Bphy_1168 Bphy_1168 Bphy_1167 Bphy_1167 Bphy_1162 Bphy_1162 Bphy_1154 Bphy_1154 Bphy_1148 Bphy_1148 atpD atpD atpA atpA Bphy_1115 Bphy_1115 ftsH-2 ftsH-2 Bphy_1061 Bphy_1061 Bphy_1044 Bphy_1044 tmk tmk Bphy_1018 Bphy_1018 lon lon clpX clpX mfd mfd Bphy_0987 Bphy_0987 Bphy_0956 Bphy_0956 dnaX dnaX rho rho clpB clpB Bphy_0920 Bphy_0920 Bphy_0915 Bphy_0915 pstB pstB ftsH ftsH Bphy_0860 Bphy_0860 Bphy_0847 Bphy_0847 era era lepA lepA Bphy_0801 Bphy_0801 Bphy_0787 Bphy_0787 Bphy_0783 Bphy_0783 rsgA rsgA metN metN cmk cmk gmk gmk Bphy_0656 Bphy_0656 Bphy_0641 Bphy_0641 Bphy_0635 Bphy_0635 Bphy_0631 Bphy_0631 Bphy_0592 Bphy_0592 Bphy_0591 Bphy_0591 Bphy_0569 Bphy_0569 fusA fusA Bphy_0555 Bphy_0555 lpxK lpxK adk adk Bphy_0520 Bphy_0520 rbsA rbsA Bphy_0494 Bphy_0494 Bphy_0486 Bphy_0486 recA recA rhlE rhlE Bphy_0411 Bphy_0411 Bphy_0393 Bphy_0393 uvrA uvrA Bphy_0327 Bphy_0327 hprK hprK Bphy_0322 Bphy_0322 ftsY ftsY Bphy_0246 Bphy_0246 Bphy_0240 Bphy_0240 Bphy_0239 Bphy_0239 Bphy_0237 Bphy_0237 Bphy_0230 Bphy_0230 Bphy_0227 Bphy_0227 potA potA Bphy_0206 Bphy_0206 bioD bioD icmF icmF Bphy_0104 Bphy_0104 Bphy_0092 Bphy_0092 Bphy_0072 Bphy_0072 hslU hslU Bphy_0056 Bphy_0056 Bphy_0013 Bphy_0013 dnaA dnaA Bphy_3869 Bphy_3869 Bphy_3960 Bphy_3960 Bphy_3976 Bphy_3976 Bphy_4007 Bphy_4007 Bphy_4025 Bphy_4025 Bphy_4858 Bphy_4858 Bphy_4859 Bphy_4859 Bphy_4904 Bphy_4904 Bphy_4965 Bphy_4965 Bphy_4972 Bphy_4972 Bphy_4976 Bphy_4976 Bphy_3855 Bphy_3855 Bphy_4977 Bphy_4977 Bphy_4980 Bphy_4980 Bphy_4982 Bphy_4982 Bphy_5066 Bphy_5066 Bphy_5103 Bphy_5103 Bphy_5107 Bphy_5107 Bphy_5145 Bphy_5145 Bphy_5151 Bphy_5151 Bphy_5158 Bphy_5158 Bphy_5181 Bphy_5181 Bphy_5193 Bphy_5193 Bphy_5217 Bphy_5217 Bphy_5251 Bphy_5251 Bphy_5281 Bphy_5281 Bphy_5309 Bphy_5309 Bphy_5314 Bphy_5314 Bphy_5323 Bphy_5323 Bphy_5324 Bphy_5324 Bphy_5367 Bphy_5367 Bphy_5368 Bphy_5368 Bphy_5438 Bphy_5438 Bphy_5449 Bphy_5449 Bphy_5479 Bphy_5479 Bphy_5495 Bphy_5495 Bphy_5508 Bphy_5508 Bphy_5517 Bphy_5517 Bphy_3834 Bphy_3834 Bphy_3833 Bphy_3833 Bphy_3801 Bphy_3801 Bphy_3778 Bphy_3778 Bphy_3777 Bphy_3777 phnN phnN Bphy_3762 Bphy_3762 Bphy_3733 Bphy_3733 Bphy_3711 Bphy_3711 Bphy_3699 Bphy_3699 Bphy_3627 Bphy_3627 Bphy_3602 Bphy_3602 Bphy_3594 Bphy_3594 Bphy_3502 Bphy_3502 Bphy_3497 Bphy_3497 rbsA-2 rbsA-2 Bphy_3454 Bphy_3454 Bphy_3450 Bphy_3450 Bphy_3427 Bphy_3427 Bphy_3397 Bphy_3397 Bphy_3351 Bphy_3351 Bphy_3313 Bphy_3313 Bphy_3276 Bphy_3276 Bphy_3257 Bphy_3257 Bphy_3180 Bphy_3180 Bphy_3157 Bphy_3157 Bphy_3156 Bphy_3156 Bphy_3153 Bphy_3153 Bphy_3151 Bphy_3151 mnmE mnmE Bphy_3071 Bphy_3071 Bphy_3068 Bphy_3068 Bphy_3049 Bphy_3049 Bphy_3048 Bphy_3048 Bphy_3041 Bphy_3041 Bphy_3040 Bphy_3040 Bphy_3037 Bphy_3037 atpA-2 atpA-2 atpD-2 atpD-2 priA priA rep rep Bphy_2962 Bphy_2962 Bphy_2961 Bphy_2961 Bphy_2934 Bphy_2934 Bphy_2911 Bphy_2911 Bphy_2910 Bphy_2910 Bphy_2846 Bphy_2846 fusA-2 fusA-2 tuf tuf engB engB aroK-2 aroK-2 Bphy_2775 Bphy_2775 Bphy_2770 Bphy_2770 Bphy_2764 Bphy_2764 Bphy_2713 Bphy_2713 ugpC ugpC ychF ychF secA secA Bphy_2662 Bphy_2662 coaE coaE Bphy_2655 Bphy_2655 obg obg ffh ffh araG araG Bphy_2586 Bphy_2586 Bphy_2577 Bphy_2577 Bphy_2570 Bphy_2570 ruvB ruvB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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gene neighborhood
gene fusions
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Bphy_4008PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0193 ABC peptide/opine/nickel family transporter, ATPase subunit. (255 aa)
Bphy_4040KEGG: bte:BTH_I2419 cyclic peptide ABC transporter, ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase. (597 aa)
Bphy_4044PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0520 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit. (281 aa)
Bphy_4055PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0422 ABC sugar transporter, ATPase subunit. (354 aa)
Bphy_4151PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_B3028 putative partition protein ParA. (220 aa)
araG-2ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (520 aa)
Bphy_4226KEGG: bxe:Bxe_A0835 ABC oligopeptide/dipeptide transporter, duplicated ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (632 aa)
Bphy_4279PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2979 sigma54 specific transcriptional regulator containing PAS, fis family. (486 aa)
prfCPeptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (533 aa)
Bphy_4301PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2963 ABC sugar transporter, ATPase subunit. (508 aa)
potA-4Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (363 aa)
Bphy_4328PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0164 probable ATP-binding ABC transporter protein. (318 aa)
Bphy_4346FHA domain containing protein; PFAM: Forkhead-associated protein; type II secretion system protein E; KEGG: reh:H16_A0983 flp pilus assembly ATPase CpaF. (563 aa)
Bphy_4403PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2850 ABC molybdate transporter, ATPase subunit. (233 aa)
Bphy_4444PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4846 ABC transporter, ATPase subunit. (359 aa)
Bphy_4463PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0659 ABC branched chain amino acid family transporter, ATPase subunit. (265 aa)
Bphy_4464PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0660 ABC branched chain amino acid family transporter, ATPase subunit. (237 aa)
Bphy_4501KEGG: bxe:Bxe_B0753 ABC oligopeptide/dipeptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (332 aa)
Bphy_4502KEGG: bxe:Bxe_B0754 ABC oligopeptide/dipeptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (329 aa)
Bphy_4523TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bmn:BMA10247_A0576 translation elongation factor, selenocysteine-specific. (646 aa)
Bphy_4526Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: bvi:Bcep1808_5664 transcriptional regulator, winged helix family. (468 aa)
Bphy_4528PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: serine/threonine protein kinase; KEGG: bvi:Bcep1808_5666 histidine kinase, dimerisation/phosphoacceptor. (1668 aa)
Bphy_4555PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1061 ABC polar amino acid family transporter, ATPase subunit. (299 aa)
Bphy_4588Adenylate/guanylate cyclase with TPR repeats; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; sterile alpha motif SAM protein; Sterile alpha motif homology 2; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: reh:H16_A1278 ATP-dependent transcriptional regulator containing adenylate cyclase related domains. (1096 aa)
phnCPhosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (269 aa)
Bphy_4658PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1404 ABC sugar transporter, ATPase subunit. (510 aa)
Bphy_4685PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2277 ABC efflux pump, ATPase subunit. (315 aa)
Bphy_4748PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1077 ABC transporter related. (611 aa)
Bphy_4752Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A3376 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family. (477 aa)
Bphy_4783PFAM: Circadian clock protein KaiC central region; SMART: AAA ATPase; KEGG: ppf:Pput_1936 non-specific serine/threonine protein kinase. (479 aa)
Bphy_4797KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases. (590 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (740 aa)
Bphy_2505DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (555 aa)
Bphy_2493PFAM: deoxynucleoside kinase; KEGG: bxe:Bxe_A3957 putative deoxynucleoside kinase. (231 aa)
Bphy_2489TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: bxe:Bxe_A3953 hypothetical protein. (257 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (317 aa)
Bphy_2472Exopolysaccharide transport protein family; KEGG: bxe:Bxe_A3864 exopolysaccharide export associated tyrosine kinase; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (741 aa)
potA-3Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (363 aa)
Bphy_2367PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_4341 ABC transporter related. (252 aa)
Bphy_2353PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_4930 ABC transporter related. (383 aa)
xylGD-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (525 aa)
cysCAdenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. (219 aa)
Bphy_2313PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: net:Neut_0152 ABC transporter-related protein. (450 aa)
Bphy_2302Hypothetical protein; KEGG: bmn:BMA10247_2180 putative capsular polysaccharide biosynthesis protein. (275 aa)
ureGUrease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (213 aa)
Bphy_2255Urea ABC transporter, ATP-binding protein UrtE; KEGG: bxe:Bxe_A3687 ABC branched chain amino acid family transporter, ATPase subunit; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase. (230 aa)
Bphy_2254TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bxe:Bxe_A3686 ABC branched chain amino acid family transporter, ATPase subunit. (287 aa)
Bphy_2244PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3675 ABC sugar transporter, ATPase subunit. (495 aa)
Bphy_2231Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (442 aa)
Bphy_2211PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3500 ABC Fe3+-hydroxamate/cobalamin transporter, ATPase subunit. (269 aa)
Bphy_2204Adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (182 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (484 aa)
Bphy_2199PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A3490 putative ParA family ATPase. (234 aa)
Bphy_2189Cobyrinic acid ac-diamide synthase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (362 aa)
Bphy_2166PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3393 ABC basic amino acid transporter, ATPase subunit. (261 aa)
Bphy_2155PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3382 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit. (448 aa)
Bphy_2152Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A3379 sigma54 specific transcriptional regulator, fis family. (351 aa)
Bphy_2148Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A3376 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family. (503 aa)
Bphy_2125PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3340 ABC transporter, duplicated ATPase subunits. (641 aa)
Bphy_2101PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A3315 putative ATPase, AAA family protein. (280 aa)
Bphy_2089PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bxe:Bxe_A3303 putative cell division protein; Belongs to the FtsK/SpoIIIE/SftA family. (1369 aa)
Bphy_2082PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A3295 putative ATP-dependent RNA helicase 2; Belongs to the DEAD box helicase family. (482 aa)
msbALipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (597 aa)
Bphy_2054PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bxe:Bxe_A3249 putative two-component regulatory protein sensor kinase, KdpD. (949 aa)
Bphy_1972KEGG: bte:BTH_I0443 hypothetical protein. (235 aa)
uvrBExcinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (697 aa)
Bphy_1789PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2925 ABC lysine/arginine/ornithine transporter, ATPase subunit. (263 aa)
recCExodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1121 aa)
recBExodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1241 aa)
recDExodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (672 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (965 aa)
Bphy_1722TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bpd:BURPS668_1748 GTP-binding protein TypA. (608 aa)
Bphy_1718PFAM: AFG1-family ATPase; KEGG: bxe:Bxe_A2809 putative ATPase, AFG1-like. (365 aa)
Bphy_1689KEGG: reh:H16_A1857 uncharacterized protein involved in exopolysaccharide biosynthesis; TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein. (744 aa)
ssuBABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (330 aa)
nodINodulation ABC transporter NodI; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system. (304 aa)
cysASulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (352 aa)
Bphy_1605PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1320 ABC branched chain amino acid family transporter, ATPase subunit. (256 aa)
Bphy_1604PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1321 ABC branched chain amino acid family transporter, ATPase subunit. (237 aa)
Bphy_1599PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1327 ABC sugar transporter, ATPase subunit. (267 aa)
Bphy_1590PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A1337 DNA helicase II protein. (790 aa)
Bphy_1549Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1997 aa)
aroKTranscriptional regulator, XRE family with shikimate kinase activity; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (317 aa)
Bphy_1529PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1434 ABC polar amino acid transporter, ATPase subunit. (255 aa)
Bphy_1504PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1465 ABC polyamine transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (350 aa)
Bphy_1488KEGG: bxe:Bxe_A1513 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases. (1462 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (504 aa)
lolDLipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (247 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (553 aa)
derSmall GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (446 aa)
hflXGTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (414 aa)
purAAdenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (448 aa)
Bphy_1403SMART: helicase c2; KEGG: bxe:Bxe_A1612 putative ATP-dependent helicase. (757 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (892 aa)
Bphy_1380PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (539 aa)
Bphy_1367PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A1652 putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (556 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (458 aa)
Bphy_1355PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1664 putative ABC transporter, dulicated ATPase subunits. (646 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1172 aa)
Bphy_1291PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1938 ABC transporter, fused ATPase subunits. (539 aa)
Bphy_1285PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1943 ABC transporter, fused ATPase subunits. (530 aa)
potA-2Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (387 aa)
Bphy_1242KEGG: bch:Bcen2424_1722 hypothetical protein. (222 aa)
Bphy_1236PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1998 ABC ribose transporter, fused ATPase subunits. (520 aa)
Bphy_1229PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bxe:Bxe_A2005 putative serine protein kinase, PrkA. (640 aa)
Bphy_1168KEGG: bxe:Bxe_B0140 hypothetical protein. (436 aa)
Bphy_1167PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_B0141 DEAD/DEAH box helicase. (744 aa)
Bphy_1162PFAM: protein of unknown function DUF344; KEGG: reu:Reut_A1113 protein of unknown function DUF344. (365 aa)
Bphy_1154PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B3697 ABC transporter related. (246 aa)
Bphy_1148PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2600 ABC transporter related. (264 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (489 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (525 aa)
Bphy_1115KEGG: bmn:BMA10247_A2318 hypothetical protein. (579 aa)
ftsH-2ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (653 aa)
Bphy_1061Capsular exopolysaccharide family; KEGG: bxe:Bxe_A2242 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (730 aa)
Bphy_1044TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: bxe:Bxe_A2262 DNA-directed DNA polymerase. (349 aa)
tmkdTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (206 aa)
Bphy_1018PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2288 ABC transporter, ATPase subunit. (228 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (805 aa)
clpXATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (423 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1164 aa)
Bphy_0987PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2322 ABC transporter, ATPase subunit. (246 aa)
Bphy_0956PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2356 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit. (274 aa)
dnaXDNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (793 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (420 aa)
clpBATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (865 aa)
Bphy_0920PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: bur:Bcep18194_A5166 PhoH-like protein. (606 aa)
Bphy_0915Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (462 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (282 aa)
ftsHATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (629 aa)
Bphy_0860PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1243 ABC multidrug efflux pump, fused ATPase and inner membrane subunits. (630 aa)
Bphy_0847Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_A1091 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family. (460 aa)
eraGTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (287 aa)
lepAGTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (597 aa)
Bphy_0801PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A1045 putative DNA helicase. (750 aa)
Bphy_0787Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_A1029 sigma54 specific transcriptional regulator, fis family. (464 aa)
Bphy_0783Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_A1021 sigma54 specific transcriptional regulator, fis family. (495 aa)
rsgARibosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (317 aa)
metNABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)
cmkKEGG: bxe:Bxe_A0981 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. (228 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (228 aa)
Bphy_0656TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A3424 septum site-determining protein MinD. (271 aa)
Bphy_0641PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A3436 putative ATPase. (453 aa)
Bphy_0635PFAM: cell divisionFtsK/SpoIIIE; KEGG: bxe:Bxe_A3441 putative cell division protein. (755 aa)
Bphy_0631PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A3448 ABC sugar transporter, ATPase subunit. (371 aa)
Bphy_0592PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4331 ABC transporter related. (238 aa)
Bphy_0591PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_2495 ABC transporter related. (258 aa)
Bphy_0569KEGG: bxe:Bxe_A0801 putative ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family. (766 aa)
fusATranslation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (701 aa)
Bphy_0555KEGG: bxe:Bxe_A0787 ABC oligopeptide/dipeptide transporter, fused ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (701 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (338 aa)
adkNucleoside-triphosphate--adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (221 aa)
Bphy_0520PFAM: protein of unknown function UPF0079; KEGG: bxe:Bxe_A0747 protein of unknown function UPF0079. (184 aa)
rbsAABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (511 aa)
Bphy_0494PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A0724 ABC sugar transporter, ATPase subunit. (369 aa)
Bphy_0486PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0716 ABC Mn2+/Zn2+ transporter, ATPase subunit. (309 aa)
recArecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (358 aa)
rhlEDEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. (522 aa)
Bphy_0411PFAM: PhoH family protein; KEGG: bxe:Bxe_A0629 putative PhoH-family protein. (362 aa)
Bphy_0393PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A4027 ABC transporter, fused ATPase and inner membrane subunits. (631 aa)
uvrAExcinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1032 aa)
Bphy_0327PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A4121 ABC transporter, ATPase subunit. (260 aa)
hprKHPr kinase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). (322 aa)
Bphy_0322Conserved hypothetical protein; Displays ATPase and GTPase activities. (297 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (392 aa)
Bphy_0246Hypothetical protein; KEGG: mem:Memar_2180 AAA ATPase. (1577 aa)
Bphy_0240Helicase superfamily 1 and 2 ATP-binding; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: rpe:RPE_2167 DEAD/DEAH box helicase domain protein. (2097 aa)
Bphy_0239PFAM: NERD domain protein; KEGG: rpe:RPE_2166 hypothetical protein. (579 aa)
Bphy_0237PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: rpe:RPE_2164 helicase domain protein. (990 aa)
Bphy_0230Mg chelatase, subunit ChlI; KEGG: bxe:Bxe_A4192 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (484 aa)
Bphy_0227Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A4195 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family. (452 aa)
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (359 aa)
Bphy_0206PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A4224 ABC transporter, ATPase subunit. (296 aa)
bioDDethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (239 aa)
icmFmethylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1127 aa)
Bphy_0104PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A4335 putative ATP-dependent protease La. (325 aa)
Bphy_0092PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A4354 putative ATPase. (296 aa)
Bphy_0072PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4377 hypothetical protein. (362 aa)
hslUHeat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (447 aa)
Bphy_0056PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_A4394 hypothetical protein. (278 aa)
Bphy_0013PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bte:BTH_II0214 ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. (463 aa)
dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (518 aa)
Bphy_3869KEGG: vei:Veis_2156 ABC transporter related; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (295 aa)
Bphy_3960PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0494 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit. (265 aa)
Bphy_3976PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_2010 ABC transporter, ATP-binding protein. (257 aa)
Bphy_4007PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0194 ABC peptide/opine/nickel family transporter, ATPase subunit. (297 aa)
Bphy_4025Transcriptional regulator, NifA subfamily, Fis Family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2332 transcriptional regulator, NifA subfamily, fis family. (532 aa)
Bphy_4858PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4354 IstB domain protein ATP-binding protein. (252 aa)
Bphy_4859PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP_4751 amino acid ABC transporter, ATP-binding protein. (266 aa)
Bphy_4904PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein. (262 aa)
Bphy_4965PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6755 ABC transporter related. (253 aa)
Bphy_4972Hypothetical protein; KEGG: hau:Haur_3952 Tn7-like transposition protein C. (549 aa)
Bphy_4976KEGG: eli:ELI_00750 hypothetical protein. (812 aa)
Bphy_3855PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_B0632 hypothetical protein. (308 aa)
Bphy_4977PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mem:Memar_1561 AAA family ATPase, CDC48 subfamily. (904 aa)
Bphy_4980PFAM: protein of unknown function DUF87; SMART: AAA ATPase; KEGG: pol:Bpro_5073 ATPase-like. (570 aa)
Bphy_4982KEGG: sru:SRU_2817 hypothetical protein. (1366 aa)
Bphy_5066KEGG: bxe:Bxe_B1874 ABC transporter, ATPase subunit; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (367 aa)
Bphy_5103PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1826 ABC amino acid transporter, ATPase subunit. (263 aa)
Bphy_5107PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1822 ABC amino acid transporter, ATPase subunit. (288 aa)
Bphy_5145KEGG: bxe:Bxe_B0599 ABC polar amino acid family transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase. (567 aa)
Bphy_5151KEGG: bbt:BBta_6505 putative ABC transporter (ATP-binding/permease protein); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase. (543 aa)
Bphy_5158PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO1928 putative ribose transport ATP-binding protein (RbsA). (493 aa)
Bphy_5181PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; KEGG: sme:SMa1591 putative adenylate cyclase. (1227 aa)
Bphy_5193PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_C7264 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (481 aa)
Bphy_5217KEGG: bxe:Bxe_B1236 putative GTP-binding protein. (878 aa)
Bphy_5251PFAM: ABC transporter transmembrane region; response regulator receiver; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6441 response regulator receiver protein. (893 aa)
Bphy_5281PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_B1153 ATP-dependent helicase, DEAD/DEAH family. (1497 aa)
Bphy_5309PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: bxe:Bxe_B1180 hypothetical protein. (756 aa)
Bphy_5314Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_B1183 sigma54 specific transcriptional regulator, fis family. (502 aa)
Bphy_5323Response regulator receiver protein; KEGG: bxe:Bxe_B1187 putative pilus assembly protein CpaE. (400 aa)
Bphy_5324PFAM: type II secretion system protein E; KEGG: rso:RSc0652 probable secretion ATPase protein. (462 aa)
Bphy_5367PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3046 putative sugar-phosphate ATP-binding ABC transporter protein; Belongs to the ABC transporter superfamily. (370 aa)
Bphy_5368PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3047 probable ATP-binding ABC transporter protein; Belongs to the ABC transporter superfamily. (370 aa)
Bphy_5438PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2080 ABC sugar transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (365 aa)
Bphy_5449PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_3797 ABC transporter related. (622 aa)
Bphy_5479PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I1228 glutamate/aspartate ABC transporter, ATP-binding protein. (242 aa)
Bphy_5495PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1887 putative ATP-dependent Clp protease, ATP-binding subunit; Belongs to the ClpA/ClpB family. (902 aa)
Bphy_5508PFAM: protein of unknown function DUF344; KEGG: reu:Reut_B4193 protein of unknown function DUF344. (283 aa)
Bphy_5517PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_6194 ABC transporter related. (516 aa)
Bphy_3834Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bxe:Bxe_B0475 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter, fused ATPase and inner membrane subunits. (1018 aa)
Bphy_3833Putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_B0476 sigma54 specific transcriptional regulator with PAS sensor, fis family. (450 aa)
Bphy_3801PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_B2421 putative MxaR-like protein. (339 aa)
Bphy_3778Phosphonate C-P lyase system protein PhnL; KEGG: bxe:Bxe_B2184 ABC phophonate transporter, ATPase subunit PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase. (251 aa)
Bphy_3777Phosphonate C-P lyase system protein PhnK; KEGG: bxe:Bxe_B2183 ABC phophonate transporter, ATPase subunit PhnK; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase. (256 aa)
phnNPhosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (200 aa)
Bphy_3762GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0310 sigma54 specific transcriptional regulator with GAF sensor, fis family. (649 aa)
Bphy_3733Capsular exopolysaccharide family; KEGG: bam:Bamb_6487 hypothetical protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (780 aa)
Bphy_3711PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_0222 ABC transporter related. (235 aa)
Bphy_3699TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; KEGG: bte:BTH_I0620 YbbB; Belongs to the SelU family. (366 aa)
Bphy_3627PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1640 ABC lipoprotein exporter, ATPase subunit. (238 aa)
Bphy_3602PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0155 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit. (279 aa)
Bphy_3594PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit. (266 aa)
Bphy_3502PFAM: protein of unknown function DUF344; KEGG: reh:H16_A1271 hypothetical protein. (273 aa)
Bphy_3497PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A2446 ABC transporter component. (256 aa)
rbsA-2ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (516 aa)
Bphy_3454PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bxe:Bxe_B0732 ABC bacteriocin/lantibiotic exporter, fused ATPase inner membrane and peptidase subunits. (706 aa)
Bphy_3450KEGG: bpd:BURPS668_A2027 glycine betaine/L-proline ABC transporter, ATP-binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (390 aa)
Bphy_3427GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1075 sigma54 specific transcriptional regulator with GAF sensor, fis family. (648 aa)
Bphy_3397PFAM: Terminase; KEGG: son:SO_2967 hypothetical phage terminase large subunit. (581 aa)
Bphy_3351PFAM: NERD domain protein; KEGG: bxe:Bxe_B1774 hypothetical protein. (557 aa)
Bphy_3313Response regulator receiver protein; PFAM: sigma-54 factor interaction domain-containing protein; KEGG: bpd:BURPS668_0636 sigma-54 dependent transcriptional regulator. (446 aa)
Bphy_3276Capsular exopolysaccharide family; KEGG: psa:PST_2493 tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (736 aa)
Bphy_3257TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_B2039 hypothetical protein. (262 aa)
Bphy_3180PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_7628 ABC transporter ATP-binding protein. (254 aa)
Bphy_3157PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bxe:Bxe_B1656 CobB. (434 aa)
Bphy_3156cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (200 aa)
Bphy_3153TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_B1647 CobW. (369 aa)
Bphy_3151KEGG: bxe:Bxe_B1645 putative magnesium chelatase, ChlI subunit; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (342 aa)
mnmEtRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (466 aa)
Bphy_3071General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (515 aa)
Bphy_3068PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4503 putative cobalamin synthesis protein/P47K. (419 aa)
Bphy_3049PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0017 ABC branched chain amino acid family transporter, ATPase subunit. (263 aa)
Bphy_3048PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0018 ABC branched chain amino acid family transporter, ATPase subunit. (251 aa)
Bphy_3041ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0026 ABC branched chain amino acid family transporter, fused ATPase and inner membrane subunits; Belongs to the binding-protein-dependent transport system permease family. (594 aa)
Bphy_3040PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0027 ABC branched chain amino acid family transporter, ATPase subunit. (253 aa)
Bphy_3037PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A0030 chromosome partitioning protein ParA. (256 aa)
atpA-2ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (513 aa)
atpD-2ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (464 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (752 aa)
repUvrD/REP helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (731 aa)
Bphy_2962PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: bxe:Bxe_A0132 flagellar biosynthesis protein, FlhF. (644 aa)
Bphy_2961KEGG: bxe:Bxe_A0133 flagellar biosynthesis protein FlhG. (293 aa)
Bphy_2934ATPase, FliI/YscN family; KEGG: bxe:Bxe_A0163 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (547 aa)
Bphy_2911KEGG: bxe:Bxe_A0185 ABC dipeptide/oligopeptide/nickel transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (334 aa)
Bphy_2910KEGG: bxe:Bxe_A0186 ABC dipeptide/oligopeptide/nickel transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (345 aa)
Bphy_2846KEGG: bxe:Bxe_A0308 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. (615 aa)
fusA-2Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (700 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
engBGTP-binding protein HSR1-related; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (220 aa)
aroK-2Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (183 aa)
Bphy_2775PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bte:BTH_I3009 ABC transporter, ATP-binding protein. (577 aa)
Bphy_2770PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0387 ABC transporter, ATPase subunit, toluene tolerance Ttg2A-like. (273 aa)
Bphy_2764PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0393 ABC multidrug efflux pump, ATPase subunit. (308 aa)
Bphy_2713PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I2924 ABC transporter, ATP-binding protein. (555 aa)
ugpCABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (363 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (936 aa)
Bphy_2662PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: bxe:Bxe_A0497 putative ATP/GTP-binding protein, AAA ATPase superfamily. (289 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (200 aa)
Bphy_2655PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: bxe:Bxe_A0504 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB. (432 aa)
obgGTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (370 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (455 aa)
araGABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (504 aa)
Bphy_2586KEGG: bxe:Bxe_A0578 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta. (375 aa)
Bphy_2577KEGG: bxe:Bxe_A0592 carbohydrate kinase, thermoresistant glucokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase. (164 aa)
Bphy_2570PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0600 ABC His/Glu/Gln/Arg/opine family transporter, ATPase subunit. (241 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (363 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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