STRINGSTRING
Bphy_1588 Bphy_1588 Bphy_1850 Bphy_1850 acsA acsA Bphy_2685 Bphy_2685 Bphy_2693 Bphy_2693 Bphy_3025 Bphy_3025 Bphy_3530 Bphy_3530 Bphy_4039 Bphy_4039 Bphy_4075 Bphy_4075 Bphy_4840 Bphy_4840 Bphy_4848 Bphy_4848 Bphy_4871 Bphy_4871 Bphy_4911 Bphy_4911 Bphy_4921 Bphy_4921 Bphy_4939 Bphy_4939 Bphy_5127 Bphy_5127 Bphy_0524 Bphy_0524 Bphy_0694 Bphy_0694 Bphy_1027 Bphy_1027 Bphy_1672 Bphy_1672
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bphy_1588TIGRFAM: propionate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A1339 acetyl-coenzyme A synthetase. (666 aa)
Bphy_1850PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A1395 putative acetyl-CoA synthetase. (557 aa)
acsAacetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (660 aa)
Bphy_2685PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0474 putative long-chain-fatty-acid-CoA-ligase, FadD. (557 aa)
Bphy_2693phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (434 aa)
Bphy_3025PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0042 putative long-chain-fatty-acid--CoA ligase. (576 aa)
Bphy_3530PFAM: AMP-dependent synthetase and ligase; KEGG: bch:Bcen2424_5777 AMP-dependent synthetase and ligase. (662 aa)
Bphy_4039TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bxe:Bxe_B0525 non-ribosomal peptide synthase. (3224 aa)
Bphy_4075PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B0275 putative acid-coenzyme A ligase. (545 aa)
Bphy_4840PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2094 AMP-dependent synthetase and ligase. (522 aa)
Bphy_4848PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2094 AMP-dependent synthetase and ligase. (498 aa)
Bphy_4871PFAM: AMP-dependent synthetase and ligase; KEGG: gtn:GTNG_0892 long-chain fatty-acid-CoA ligase. (506 aa)
Bphy_4911PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_0683 AMP-dependent synthetase and ligase. (550 aa)
Bphy_4921PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_4536 putative fatty acid CoA ligase. (531 aa)
Bphy_4939PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6650 AMP-dependent synthetase and ligase. (555 aa)
Bphy_5127PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B1085 AMP-binding enzyme. (568 aa)
Bphy_0524PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0751 AMP-dependent synthetase and ligase. (525 aa)
Bphy_0694PFAM: AMP-dependent synthetase and ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bxe:Bxe_A0931 putative AMP-dependent synthetase and ligase. (562 aa)
Bphy_1027PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2275 putative medium-chain-fatty-acid-CoA ligase. (560 aa)
Bphy_1672TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain. (3335 aa)
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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