STRINGSTRING
LOC111145384 LOC111145384 LOC111139250 LOC111139250 LOC111141595 LOC111141595 LOC111144427 LOC111144427 LOC111144952 LOC111144952 LOC111145543 LOC111145543 LOC111146568 LOC111146568 LOC111147681 LOC111147681 LOC111150644 LOC111150644 LOC111151335 LOC111151335 LOC111152041 LOC111152041 LOC111152562 LOC111152562 LOC111152617 LOC111152617 LOC111153183 LOC111153183 LOC111155040 LOC111155040 LOC111154664 LOC111154664 LOC111159434 LOC111159434 LOC111158068 LOC111158068 LOC111158439 LOC111158439 LOC111161133 LOC111161133
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111145384Twinkle protein, mitochondrial. (684 aa)
LOC111139250DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (996 aa)
LOC111141595Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity but is also capable of endoduclease activity on linear substrates. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair, possibly via the processing of displaced DNA containing Okazaki fragments during RNA- primed DNA synthesis on the lagging strand or via processing of DNA flaps during long-patch base excision repair; Belongs to the MGME1 family. (341 aa)
LOC111144427DNA-directed primase/polymerase protein isoform X1. (559 aa)
LOC111144952DNA replication ATP-dependent helicase/nuclease DNA2. (1061 aa)
LOC111145543Endonuclease. (301 aa)
LOC111146568Ribonucleoside-diphosphate reductase subunit M2 B. (351 aa)
LOC111147681Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
LOC111150644Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1013 aa)
LOC111151335DNA ligase. (1064 aa)
LOC111152041Single-stranded DNA-binding protein, mitochondrial. (148 aa)
LOC111152562Myocyte-specific enhancer factor 2A. (499 aa)
LOC111152617LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1. (1224 aa)
LOC111153183ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (664 aa)
LOC111155040Dynamin-like 120 kDa protein, mitochondrial isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1015 aa)
LOC111154664Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (321 aa)
LOC111159434Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (792 aa)
LOC111158068DNA polymerase subunit gamma-2, mitochondrial isoform X1. (485 aa)
LOC111158439Protein Mpv17 isoform X1; Belongs to the peroxisomal membrane protein PXMP2/4 family. (176 aa)
LOC111161133Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (379 aa)
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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