(8 nodes) Endodermal cell fate commitment network (Enhydra lutris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111160609	RNA polymerase-associated protein LEO1 isoform X1. (665 aa)
	LOC111140117	RNA polymerase-associated protein LEO1-like. (298 aa)
	LOC111142563	Transcription factor GATA-6. (592 aa)
	LOC111155469	Transcription factor SOX-17. (406 aa)
	LOC111155076	Eomesodermin homolog isoform X1. (706 aa)
	LOC111161378	RNA polymerase II-associated factor 1 homolog isoform X2. (536 aa)
	LOC111161337	RNA polymerase-associated protein RTF1 homolog. (710 aa)
	LOC111159484	RNA polymerase-associated protein CTR9 homolog isoform X1. (1173 aa)

Your Current Organism:

Enhydra lutris

NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111140117	LOC111159484	A0A2Y9IIW4	A0A2Y9L8C4	RNA polymerase-associated protein LEO1-like.	RNA polymerase-associated protein CTR9 homolog isoform X1.	0.997
LOC111140117	LOC111161337	A0A2Y9IIW4	A0A2Y9L424	RNA polymerase-associated protein LEO1-like.	RNA polymerase-associated protein RTF1 homolog.	0.996
LOC111140117	LOC111161378	A0A2Y9IIW4	A0A2Y9L395	RNA polymerase-associated protein LEO1-like.	RNA polymerase II-associated factor 1 homolog isoform X2.	0.998
LOC111142563	LOC111155076	A0A2Y9IS32	A0A2Y9KNM8	Transcription factor GATA-6.	Eomesodermin homolog isoform X1.	0.538
LOC111142563	LOC111155469	A0A2Y9IS32	A0A2Y9KDX5	Transcription factor GATA-6.	Transcription factor SOX-17.	0.867
LOC111155076	LOC111142563	A0A2Y9KNM8	A0A2Y9IS32	Eomesodermin homolog isoform X1.	Transcription factor GATA-6.	0.538
LOC111155076	LOC111155469	A0A2Y9KNM8	A0A2Y9KDX5	Eomesodermin homolog isoform X1.	Transcription factor SOX-17.	0.772
LOC111155469	LOC111142563	A0A2Y9KDX5	A0A2Y9IS32	Transcription factor SOX-17.	Transcription factor GATA-6.	0.867
LOC111155469	LOC111155076	A0A2Y9KDX5	A0A2Y9KNM8	Transcription factor SOX-17.	Eomesodermin homolog isoform X1.	0.772
LOC111159484	LOC111140117	A0A2Y9L8C4	A0A2Y9IIW4	RNA polymerase-associated protein CTR9 homolog isoform X1.	RNA polymerase-associated protein LEO1-like.	0.997
LOC111159484	LOC111160609	A0A2Y9L8C4	A0A2Y9LDD1	RNA polymerase-associated protein CTR9 homolog isoform X1.	RNA polymerase-associated protein LEO1 isoform X1.	0.997
LOC111159484	LOC111161337	A0A2Y9L8C4	A0A2Y9L424	RNA polymerase-associated protein CTR9 homolog isoform X1.	RNA polymerase-associated protein RTF1 homolog.	0.998
LOC111159484	LOC111161378	A0A2Y9L8C4	A0A2Y9L395	RNA polymerase-associated protein CTR9 homolog isoform X1.	RNA polymerase II-associated factor 1 homolog isoform X2.	0.998
LOC111160609	LOC111159484	A0A2Y9LDD1	A0A2Y9L8C4	RNA polymerase-associated protein LEO1 isoform X1.	RNA polymerase-associated protein CTR9 homolog isoform X1.	0.997
LOC111160609	LOC111161337	A0A2Y9LDD1	A0A2Y9L424	RNA polymerase-associated protein LEO1 isoform X1.	RNA polymerase-associated protein RTF1 homolog.	0.996
LOC111160609	LOC111161378	A0A2Y9LDD1	A0A2Y9L395	RNA polymerase-associated protein LEO1 isoform X1.	RNA polymerase II-associated factor 1 homolog isoform X2.	0.998
LOC111161337	LOC111140117	A0A2Y9L424	A0A2Y9IIW4	RNA polymerase-associated protein RTF1 homolog.	RNA polymerase-associated protein LEO1-like.	0.996
LOC111161337	LOC111159484	A0A2Y9L424	A0A2Y9L8C4	RNA polymerase-associated protein RTF1 homolog.	RNA polymerase-associated protein CTR9 homolog isoform X1.	0.998
LOC111161337	LOC111160609	A0A2Y9L424	A0A2Y9LDD1	RNA polymerase-associated protein RTF1 homolog.	RNA polymerase-associated protein LEO1 isoform X1.	0.996
LOC111161337	LOC111161378	A0A2Y9L424	A0A2Y9L395	RNA polymerase-associated protein RTF1 homolog.	RNA polymerase II-associated factor 1 homolog isoform X2.	0.986