44 items (Enhydra lutris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111157550	Cytoskeleton-associated protein 4. (588 aa)
	LOC111161289	40S ribosomal protein S29. (56 aa)
	LOC111161946	Phosphatidylinositol 4-kinase beta isoform X2; Belongs to the PI3/PI4-kinase family. (816 aa)
	LOC111161216	Ran guanine nucleotide release factor isoform X1. (194 aa)
	LOC111158295	Translocation protein SEC63 homolog. (760 aa)
	LOC111160607	Fukutin-related protein. (495 aa)
	LOC111160732	60S ribosomal protein L18. (188 aa)
	LOC111159106	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (607 aa)
	LOC111159979	Inositol 1,4,5-trisphosphate receptor type 2 isoform X1. (2701 aa)
	LOC111156944	LOW QUALITY PROTEIN: 40S ribosomal protein S28-like. (69 aa)
	LOC111159083	Protein transport protein Sec61 subunit alpha. (476 aa)
	LOC111157810	Lecithin retinol acyltransferase. (230 aa)
	LOC111158158	Coiled-coil domain-containing protein 47. (483 aa)
	LOC111156320	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (288 aa)
	LOC111157231	LOW QUALITY PROTEIN: ribosomal protein L18-like. (359 aa)
	LOC111156535	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1. (350 aa)
	LOC111157034	Protein transport protein Sec61 subunit gamma isoform X1. (68 aa)
	LOC111156446	Signal peptide peptidase-like 3. (384 aa)
	LOC111155570	Protein transport protein Sec61 subunit alpha. (476 aa)
	LOC111154705	Macoilin isoform X1. (664 aa)
	LOC111154620	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (727 aa)
	LOC111151503	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	LOC111153704	Signal recognition particle receptor subunit alpha isoform X1. (638 aa)
	LOC111153359	Pyruvate kinase; Belongs to the pyruvate kinase family. (553 aa)
	LOC111153181	Poly [ADP-ribose] polymerase. (631 aa)
	LOC111151729	Carbonic anhydrase 4; Belongs to the alpha-carbonic anhydrase family. (313 aa)
	LOC111152507	Inositol 1,4,5-trisphosphate receptor type 3. (2671 aa)
	LOC111151706	Orexin; Neuropeptides that play a significant role in the regulation of food intake and sleep-wakefulness, possibly by coordinating the complex behavioral and physiologic responses of these complementary homeostatic functions. A broader role in the homeostatic regulation of energy metabolism, autonomic function, hormonal balance and the regulation of body fluids, is also suggested. Belongs to the orexin family. (131 aa)
	LOC111150574	Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family. (1058 aa)
	LOC111151356	Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (177 aa)
	LOC111150778	SUN domain-containing ossification factor isoform X1. (1255 aa)
	LOC111150631	Myocilin. (491 aa)
	LOC111149065	Alpha-2-macroglobulin receptor-associated protein. (371 aa)
	LOC111147730	Laforin. (331 aa)
	LOC111146146	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
	LOC111144005	Inositol 1,4,5-trisphosphate receptor type 1 isoform X1. (2709 aa)
	LOC111145644	prostaglandin-H2 D-isomerase; Belongs to the calycin superfamily. Lipocalin family. (191 aa)
	LOC111145329	Pulmonary surfactant-associated protein D. (375 aa)
	LOC111145344	Pulmonary surfactant-associated protein A. (248 aa)
	LOC111143377	Endoribonuclease ZC3H12A isoform X1. (576 aa)
	LOC111141426	Minor histocompatibility antigen H13 isoform X1. (427 aa)
	LOC111141376	Double-stranded RNA-binding protein Staufen homolog 1 isoform X1. (684 aa)
	LOC111141160	Coagulation factor XII isoform X2. (615 aa)
	LOC111140944	Poly [ADP-ribose] polymerase. (875 aa)

Your Current Organism:

Enhydra lutris

NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111140944	LOC111151503	A0A2Y9IJV6	A0A2Y9K6S1	Poly [ADP-ribose] polymerase.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.542
LOC111140944	LOC111156320	A0A2Y9IJV6	A0A2Y9KN79	Poly [ADP-ribose] polymerase.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.542
LOC111140944	LOC111156944	A0A2Y9IJV6	A0A2Y9KXD3	Poly [ADP-ribose] polymerase.	LOW QUALITY PROTEIN: 40S ribosomal protein S28-like.	0.650
LOC111140944	LOC111157231	A0A2Y9IJV6	A0A2Y9KM93	Poly [ADP-ribose] polymerase.	LOW QUALITY PROTEIN: ribosomal protein L18-like.	0.635
LOC111140944	LOC111160732	A0A2Y9IJV6	A0A2Y9L1H7	Poly [ADP-ribose] polymerase.	60S ribosomal protein L18.	0.635
LOC111140944	LOC111161289	A0A2Y9IJV6	A0A2Y9LG40	Poly [ADP-ribose] polymerase.	40S ribosomal protein S29.	0.587
LOC111141426	LOC111155570	A0A2Y9INA2	A0A2Y9KCN4	Minor histocompatibility antigen H13 isoform X1.	Protein transport protein Sec61 subunit alpha.	0.455
LOC111141426	LOC111158295	A0A2Y9INA2	A0A2Y9L397	Minor histocompatibility antigen H13 isoform X1.	Translocation protein SEC63 homolog.	0.500
LOC111141426	LOC111159083	A0A2Y9INA2	A0A2Y9KVL6	Minor histocompatibility antigen H13 isoform X1.	Protein transport protein Sec61 subunit alpha.	0.455
LOC111141426	LOC111159106	A0A2Y9INA2	A0A2Y9L0X8	Minor histocompatibility antigen H13 isoform X1.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.497
LOC111144005	LOC111152507	A0A2Y9J7B5	A0A2Y9K0M4	Inositol 1,4,5-trisphosphate receptor type 1 isoform X1.	Inositol 1,4,5-trisphosphate receptor type 3.	0.974
LOC111144005	LOC111159979	A0A2Y9J7B5	A0A2Y9KZA0	Inositol 1,4,5-trisphosphate receptor type 1 isoform X1.	Inositol 1,4,5-trisphosphate receptor type 2 isoform X1.	0.974
LOC111145329	LOC111145344	A0A2Y9J5P0	A0A2Y9J4W7	Pulmonary surfactant-associated protein D.	Pulmonary surfactant-associated protein A.	0.872
LOC111145344	LOC111145329	A0A2Y9J4W7	A0A2Y9J5P0	Pulmonary surfactant-associated protein A.	Pulmonary surfactant-associated protein D.	0.872
LOC111145344	LOC111157550	A0A2Y9J4W7	A0A2Y9L015	Pulmonary surfactant-associated protein A.	Cytoskeleton-associated protein 4.	0.748
LOC111146146	LOC111151503	A0A2Y9JC83	A0A2Y9K6S1	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.992
LOC111146146	LOC111153704	A0A2Y9JC83	A0A2Y9K633	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Signal recognition particle receptor subunit alpha isoform X1.	0.428
LOC111146146	LOC111155570	A0A2Y9JC83	A0A2Y9KCN4	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Protein transport protein Sec61 subunit alpha.	0.997
LOC111146146	LOC111156320	A0A2Y9JC83	A0A2Y9KN79	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.987
LOC111146146	LOC111156944	A0A2Y9JC83	A0A2Y9KXD3	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	LOW QUALITY PROTEIN: 40S ribosomal protein S28-like.	0.850