(12 nodes) Astral microtubule organization network (Enhydra lutris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111158717	Ezrin. (586 aa)
	LOC111151271	Importin subunit beta-1 isoform X1. (877 aa)
	LOC111148272	Centrosomal protein of 120 kDa isoform X1. (987 aa)
	LOC111154393	Disks large homolog 2 isoform X1. (919 aa)
	LOC111155042	Disks large homolog 1 isoform X1; Belongs to the MAGUK family. (927 aa)
	LOC111153462	Tubulin polymerization-promoting protein. (240 aa)
	LOC111159647	Nuclear mitotic apparatus protein 1 isoform X1. (2122 aa)
	LOC111159919	Centromere protein J. (1354 aa)
	LOC111159970	Ras-related protein Rab-11A isoform X1. (216 aa)
	LOC111148385	Ras-related protein Rab-11A-like isoform X1. (216 aa)
	LOC111160080	LIM domain kinase 2 isoform X1. (638 aa)
	LOC111161848	Ras-related protein Rab-11B. (218 aa)

Your Current Organism:

Enhydra lutris

NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111148272	LOC111159919	A0A2Y9JIP3	A0A2Y9KYZ5	Centrosomal protein of 120 kDa isoform X1.	Centromere protein J.	0.557
LOC111148385	LOC111159970	A0A2Y9JJ25	A0A2Y9L447	Ras-related protein Rab-11A-like isoform X1.	Ras-related protein Rab-11A isoform X1.	0.900
LOC111148385	LOC111161848	A0A2Y9JJ25	A0A2Y9LIQ5	Ras-related protein Rab-11A-like isoform X1.	Ras-related protein Rab-11B.	0.900
LOC111154393	LOC111155042	A0A2Y9K957	A0A2Y9KAM3	Disks large homolog 2 isoform X1.	Disks large homolog 1 isoform X1; Belongs to the MAGUK family.	0.901
LOC111155042	LOC111154393	A0A2Y9KAM3	A0A2Y9K957	Disks large homolog 1 isoform X1; Belongs to the MAGUK family.	Disks large homolog 2 isoform X1.	0.901
LOC111159919	LOC111148272	A0A2Y9KYZ5	A0A2Y9JIP3	Centromere protein J.	Centrosomal protein of 120 kDa isoform X1.	0.557
LOC111159970	LOC111148385	A0A2Y9L447	A0A2Y9JJ25	Ras-related protein Rab-11A isoform X1.	Ras-related protein Rab-11A-like isoform X1.	0.900
LOC111159970	LOC111161848	A0A2Y9L447	A0A2Y9LIQ5	Ras-related protein Rab-11A isoform X1.	Ras-related protein Rab-11B.	0.900
LOC111161848	LOC111148385	A0A2Y9LIQ5	A0A2Y9JJ25	Ras-related protein Rab-11B.	Ras-related protein Rab-11A-like isoform X1.	0.900
LOC111161848	LOC111159970	A0A2Y9LIQ5	A0A2Y9L447	Ras-related protein Rab-11B.	Ras-related protein Rab-11A isoform X1.	0.900