(13 nodes) Vascular associated smooth muscle cell differentiation network (Enhydra lutris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111151406	Receptor activity-modifying protein 2 isoform X1. (193 aa)
	LOC111152731	Mesoderm posterior protein 1. (252 aa)
	LOC111149743	Apelin receptor; Belongs to the G-protein coupled receptor 1 family. (383 aa)
	LOC111145671	Neurogenic locus notch homolog protein 1. (2562 aa)
	LOC111145664	Endoglin isoform X1. (660 aa)
	LOC111147733	Serum response factor. (508 aa)
	LOC111142563	Transcription factor GATA-6. (592 aa)
	LOC111144008	Cartilage oligomeric matrix protein. (756 aa)
	LOC111160328	Nuclear factor of activated T-cells, cytoplasmic 4 isoform X1. (900 aa)
	LOC111161096	LOW QUALITY PROTEIN: myocardin. (957 aa)
	LOC111158650	Protein quaking isoform X2. (351 aa)
	LOC111156746	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (427 aa)
	LOC111155108	Transcription factor HES-1. (281 aa)

Your Current Organism:

Enhydra lutris

NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111142563	LOC111147733	A0A2Y9IS32	A0A2Y9JF31	Transcription factor GATA-6.	Serum response factor.	0.525
LOC111145671	LOC111155108	A0A2Y9JFB7	A0A2Y9KHC7	Neurogenic locus notch homolog protein 1.	Transcription factor HES-1.	0.637
LOC111147733	LOC111142563	A0A2Y9JF31	A0A2Y9IS32	Serum response factor.	Transcription factor GATA-6.	0.525
LOC111147733	LOC111160328	A0A2Y9JF31	A0A2Y9LC58	Serum response factor.	Nuclear factor of activated T-cells, cytoplasmic 4 isoform X1.	0.909
LOC111147733	LOC111161096	A0A2Y9JF31	A0A2Y9L2Z1	Serum response factor.	LOW QUALITY PROTEIN: myocardin.	0.957
LOC111155108	LOC111145671	A0A2Y9KHC7	A0A2Y9JFB7	Transcription factor HES-1.	Neurogenic locus notch homolog protein 1.	0.637
LOC111160328	LOC111147733	A0A2Y9LC58	A0A2Y9JF31	Nuclear factor of activated T-cells, cytoplasmic 4 isoform X1.	Serum response factor.	0.909
LOC111161096	LOC111147733	A0A2Y9L2Z1	A0A2Y9JF31	LOW QUALITY PROTEIN: myocardin.	Serum response factor.	0.957