STRINGSTRING
LOC111143217 LOC111143217 LOC111140725 LOC111140725 LOC111161476 LOC111161476 LOC111162164 LOC111162164 LOC111157565 LOC111157565 LOC111158482 LOC111158482 LOC111155866 LOC111155866 LOC111154078 LOC111154078
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111143217Protein archease isoform X1. (179 aa)
LOC111140725Protein FAM98B. (432 aa)
LOC111161476Protein FAM98C isoform X1. (353 aa)
LOC111162164UPF0568 protein C14orf166 homolog. (244 aa)
LOC111157565RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. (505 aa)
LOC111158482Protein FAM98A. (517 aa)
LOC111155866Ashwin isoform X1. (232 aa)
LOC111154078ATP-dependent RNA helicase DDX1 isoform X1. (740 aa)
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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