18 items (Enhydra lutris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111158574	Microtubule-associated tumor suppressor candidate 2 isoform X1. (1374 aa)
	LOC111158606	Calmodulin-like protein 3; Belongs to the calmodulin family. (149 aa)
	LOC111156956	Beta-actin-like protein 2 isoform X1. (376 aa)
	LOC111156896	Tubulin alpha chain-like. (154 aa)
	LOC111160249	Actin, cytoplasmic 2. (375 aa)
	LOC111138995	Ras GTPase-activating-like protein IQGAP3. (1629 aa)
	LOC111145953	CAP-Gly domain-containing linker protein 2 isoform X1. (1052 aa)
	LOC111145734	Actin, cytoplasmic 1. (375 aa)
	LOC111148214	Ras GTPase-activating-like protein IQGAP2 isoform X1. (1575 aa)
	LOC111148494	Calmodulin-1 isoform X1; Belongs to the calmodulin family. (196 aa)
	LOC111150075	Menin isoform X1. (616 aa)
	LOC111151071	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (471 aa)
	LOC111152707	Ras GTPase-activating-like protein IQGAP1 isoform X1. (1657 aa)
	LOC111152817	Cadherin-1 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. (885 aa)
	LOC111152800	LOW QUALITY PROTEIN: cadherin-1-like. (641 aa)
	LOC111154574	Actin-like protein 8; Belongs to the actin family. (366 aa)
	LOC111154823	Cell division control protein 42 homolog isoform X2. (191 aa)
	LOC111159001	Catenin beta-1. (781 aa)

Your Current Organism:

Enhydra lutris

NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111138995	LOC111145953	A0A2Y9IL71	A0A2Y9J7P4	Ras GTPase-activating-like protein IQGAP3.	CAP-Gly domain-containing linker protein 2 isoform X1.	0.406
LOC111138995	LOC111148214	A0A2Y9IL71	A0A2Y9JH92	Ras GTPase-activating-like protein IQGAP3.	Ras GTPase-activating-like protein IQGAP2 isoform X1.	0.941
LOC111138995	LOC111148494	A0A2Y9IL71	A0A2Y9JIG5	Ras GTPase-activating-like protein IQGAP3.	Calmodulin-1 isoform X1; Belongs to the calmodulin family.	0.617
LOC111138995	LOC111152707	A0A2Y9IL71	A0A2Y9K0N2	Ras GTPase-activating-like protein IQGAP3.	Ras GTPase-activating-like protein IQGAP1 isoform X1.	0.940
LOC111138995	LOC111154823	A0A2Y9IL71	A0A2Y9KAI6	Ras GTPase-activating-like protein IQGAP3.	Cell division control protein 42 homolog isoform X2.	0.982
LOC111138995	LOC111158606	A0A2Y9IL71	A0A2Y9KR42	Ras GTPase-activating-like protein IQGAP3.	Calmodulin-like protein 3; Belongs to the calmodulin family.	0.617
LOC111138995	LOC111159001	A0A2Y9IL71	A0A2Y9L6J3	Ras GTPase-activating-like protein IQGAP3.	Catenin beta-1.	0.540
LOC111145734	LOC111151071	A0A2Y9JFQ8	A0A2Y9JTY3	Actin, cytoplasmic 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.489
LOC111145734	LOC111152707	A0A2Y9JFQ8	A0A2Y9K0N2	Actin, cytoplasmic 1.	Ras GTPase-activating-like protein IQGAP1 isoform X1.	0.934
LOC111145734	LOC111154823	A0A2Y9JFQ8	A0A2Y9KAI6	Actin, cytoplasmic 1.	Cell division control protein 42 homolog isoform X2.	0.944
LOC111145734	LOC111156896	A0A2Y9JFQ8	A0A2Y9KX47	Actin, cytoplasmic 1.	Tubulin alpha chain-like.	0.425
LOC111145734	LOC111159001	A0A2Y9JFQ8	A0A2Y9L6J3	Actin, cytoplasmic 1.	Catenin beta-1.	0.447
LOC111145734	LOC111160249	A0A2Y9JFQ8	A0A2Y9KYZ3	Actin, cytoplasmic 1.	Actin, cytoplasmic 2.	0.900
LOC111145953	LOC111138995	A0A2Y9J7P4	A0A2Y9IL71	CAP-Gly domain-containing linker protein 2 isoform X1.	Ras GTPase-activating-like protein IQGAP3.	0.406
LOC111145953	LOC111148214	A0A2Y9J7P4	A0A2Y9JH92	CAP-Gly domain-containing linker protein 2 isoform X1.	Ras GTPase-activating-like protein IQGAP2 isoform X1.	0.406
LOC111145953	LOC111152707	A0A2Y9J7P4	A0A2Y9K0N2	CAP-Gly domain-containing linker protein 2 isoform X1.	Ras GTPase-activating-like protein IQGAP1 isoform X1.	0.406
LOC111145953	LOC111154823	A0A2Y9J7P4	A0A2Y9KAI6	CAP-Gly domain-containing linker protein 2 isoform X1.	Cell division control protein 42 homolog isoform X2.	0.535
LOC111148214	LOC111138995	A0A2Y9JH92	A0A2Y9IL71	Ras GTPase-activating-like protein IQGAP2 isoform X1.	Ras GTPase-activating-like protein IQGAP3.	0.941
LOC111148214	LOC111145953	A0A2Y9JH92	A0A2Y9J7P4	Ras GTPase-activating-like protein IQGAP2 isoform X1.	CAP-Gly domain-containing linker protein 2 isoform X1.	0.406
LOC111148214	LOC111148494	A0A2Y9JH92	A0A2Y9JIG5	Ras GTPase-activating-like protein IQGAP2 isoform X1.	Calmodulin-1 isoform X1; Belongs to the calmodulin family.	0.659