STRINGSTRING
LOC111143399 LOC111143399 LOC111139406 LOC111139406 LOC111138603 LOC111138603 LOC111150047 LOC111150047 LOC111138531 LOC111138531 LOC111162609 LOC111162609 LOC111162516 LOC111162516 LOC111162073 LOC111162073 LOC111160296 LOC111160296
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111143399cAMP-dependent protein kinase catalytic subunit beta isoform X1; Belongs to the protein kinase superfamily. (397 aa)
LOC111139406Histone H3; Belongs to the histone H3 family. (136 aa)
LOC111138603Histone H3.3-like. (139 aa)
LOC111150047PHD and RING finger domain-containing protein 1 isoform X1. (1651 aa)
LOC111138531Histone H3; Belongs to the histone H3 family. (136 aa)
LOC111162609Uncharacterized protein LOC111162609; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (328 aa)
LOC111162516cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily. (351 aa)
LOC111162073Histone H3; Belongs to the histone H3 family. (136 aa)
LOC111160296Histone H3; Belongs to the histone H3 family. (136 aa)
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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