10 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9TH67	Uncharacterized protein. (237 aa)
	A0A0L9TKF2	Uncharacterized protein. (141 aa)
	A0A0L9TKQ9	Uncharacterized protein. (1242 aa)
	A0A0L9TLK8	Uncharacterized protein. (188 aa)
	A0A0L9U922	Uncharacterized protein. (418 aa)
	A0A0L9UD27	Uncharacterized protein. (181 aa)
	A0A0L9UPP3	Uncharacterized protein. (349 aa)
	A0A0L9URB7	Uncharacterized protein. (146 aa)
	A0A0L9VFL5	Uncharacterized protein. (1213 aa)
	A0A0L9VNJ3	Uncharacterized protein. (146 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9TH67	A0A0L9TKF2	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A0L9TH67	A0A0L9TKQ9	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0L9TH67	A0A0L9U922	Uncharacterized protein.	Uncharacterized protein.	0.523
A0A0L9TH67	A0A0L9UPP3	Uncharacterized protein.	Uncharacterized protein.	0.658
A0A0L9TH67	A0A0L9URB7	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A0L9TH67	A0A0L9VFL5	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0L9TH67	A0A0L9VNJ3	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A0L9TKF2	A0A0L9TH67	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A0L9TKF2	A0A0L9TKQ9	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A0L9TKF2	A0A0L9TLK8	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A0L9TKF2	A0A0L9U922	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A0L9TKF2	A0A0L9UD27	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A0L9TKF2	A0A0L9UPP3	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A0L9TKF2	A0A0L9URB7	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0L9TKF2	A0A0L9VFL5	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A0L9TKF2	A0A0L9VNJ3	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0L9TKQ9	A0A0L9TH67	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0L9TKQ9	A0A0L9TKF2	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A0L9TKQ9	A0A0L9TLK8	Uncharacterized protein.	Uncharacterized protein.	0.688
A0A0L9TKQ9	A0A0L9U922	Uncharacterized protein.	Uncharacterized protein.	0.625