8 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9TY13	Uncharacterized protein. (170 aa)
	A0A0L9TZ85	Uncharacterized protein. (125 aa)
	A0A0L9UGL7	NAC domain-containing protein. (94 aa)
	A0A0L9UXJ7	Uncharacterized protein. (211 aa)
	A0A0L9V214	Uncharacterized protein. (107 aa)
	A0A0L9V6P5	Homeobox domain-containing protein. (152 aa)
	A0A0L9VBP8	Homeobox domain-containing protein. (152 aa)
	A0A0L9VMI6	NAC domain-containing protein. (203 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9TY13	A0A0L9TZ85	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A0L9TY13	A0A0L9UGL7	Uncharacterized protein.	NAC domain-containing protein.	0.532
A0A0L9TY13	A0A0L9UXJ7	Uncharacterized protein.	Uncharacterized protein.	0.554
A0A0L9TY13	A0A0L9V214	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A0L9TY13	A0A0L9V6P5	Uncharacterized protein.	Homeobox domain-containing protein.	0.531
A0A0L9TY13	A0A0L9VBP8	Uncharacterized protein.	Homeobox domain-containing protein.	0.534
A0A0L9TY13	A0A0L9VMI6	Uncharacterized protein.	NAC domain-containing protein.	0.483
A0A0L9TZ85	A0A0L9TY13	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A0L9TZ85	A0A0L9UGL7	Uncharacterized protein.	NAC domain-containing protein.	0.455
A0A0L9TZ85	A0A0L9UXJ7	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A0L9TZ85	A0A0L9V6P5	Uncharacterized protein.	Homeobox domain-containing protein.	0.473
A0A0L9TZ85	A0A0L9VBP8	Uncharacterized protein.	Homeobox domain-containing protein.	0.505
A0A0L9TZ85	A0A0L9VMI6	Uncharacterized protein.	NAC domain-containing protein.	0.487
A0A0L9UGL7	A0A0L9TY13	NAC domain-containing protein.	Uncharacterized protein.	0.532
A0A0L9UGL7	A0A0L9TZ85	NAC domain-containing protein.	Uncharacterized protein.	0.455
A0A0L9UGL7	A0A0L9UXJ7	NAC domain-containing protein.	Uncharacterized protein.	0.539
A0A0L9UGL7	A0A0L9V214	NAC domain-containing protein.	Uncharacterized protein.	0.508
A0A0L9UGL7	A0A0L9V6P5	NAC domain-containing protein.	Homeobox domain-containing protein.	0.536
A0A0L9UGL7	A0A0L9VBP8	NAC domain-containing protein.	Homeobox domain-containing protein.	0.529
A0A0L9UGL7	A0A0L9VMI6	NAC domain-containing protein.	NAC domain-containing protein.	0.556