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A0A0L9THT3 A0A0L9THT3 A0A0L9TIA2 A0A0L9TIA2 A0A0L9TJN8 A0A0L9TJN8 A0A0L9TSF1 A0A0L9TSF1 LSM4 LSM4 A0A0L9TWM5 A0A0L9TWM5 A0A0L9TWT9 A0A0L9TWT9 A0A0L9U185 A0A0L9U185 A0A0L9U235 A0A0L9U235 A0A0L9U4T4 A0A0L9U4T4 A0A0L9U659 A0A0L9U659 A0A0L9U6Z7 A0A0L9U6Z7 A0A0L9U987 A0A0L9U987 LSM4-2 LSM4-2 A0A0L9UAY1 A0A0L9UAY1 A0A0L9UGK2 A0A0L9UGK2 A0A0L9UMW8 A0A0L9UMW8 A0A0L9UPE8 A0A0L9UPE8 A0A0L9UVZ9 A0A0L9UVZ9 A0A0L9V644 A0A0L9V644 A0A0L9V893 A0A0L9V893 A0A0L9V8N6 A0A0L9V8N6 A0A0L9VKN0 A0A0L9VKN0 A0A0L9TEZ7 A0A0L9TEZ7 A0A0L9TF55 A0A0L9TF55
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0L9THT3Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
A0A0L9TIA2Small nuclear ribonucleoprotein Sm D2. (82 aa)
A0A0L9TJN8Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
A0A0L9TSF1WD_REPEATS_REGION domain-containing protein. (352 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (90 aa)
A0A0L9TWM5U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (204 aa)
A0A0L9TWT9zf-U1 domain-containing protein. (441 aa)
A0A0L9U185Uncharacterized protein. (484 aa)
A0A0L9U235Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (152 aa)
A0A0L9U4T4Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A0L9U659Nop domain-containing protein. (505 aa)
A0A0L9U6Z7Uncharacterized protein. (591 aa)
A0A0L9U987Sm domain-containing protein. (53 aa)
LSM4-2U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (148 aa)
A0A0L9UAY1Coilin_N domain-containing protein. (621 aa)
A0A0L9UGK2Sm domain-containing protein. (66 aa)
A0A0L9UMW8Uncharacterized protein. (1039 aa)
A0A0L9UPE8MPN domain-containing protein. (2358 aa)
A0A0L9UVZ9Uncharacterized protein. (413 aa)
A0A0L9V644Uncharacterized protein. (147 aa)
A0A0L9V893Uncharacterized protein. (222 aa)
A0A0L9V8N6Small nuclear ribonucleoprotein Sm D2. (102 aa)
A0A0L9VKN0Uncharacterized protein. (606 aa)
A0A0L9TEZ7Sm domain-containing protein. (61 aa)
A0A0L9TF55Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (99 aa)
Your Current Organism:
Vigna angularis
NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean
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