50 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9T4S4	SFM domain-containing protein. (410 aa)
	A0A0L9T7W1	Uncharacterized protein. (482 aa)
	A0A0L9T997	Uncharacterized protein. (695 aa)
	A0A0L9TE71	Uncharacterized protein. (811 aa)
	A0A0L9TGE2	Uncharacterized protein. (329 aa)
	A0A0L9TGX8	Uncharacterized protein. (329 aa)
	A0A0L9TH08	Uncharacterized protein. (506 aa)
	A0A0L9THT3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
	A0A0L9TIB6	Uncharacterized protein. (828 aa)
	A0A0L9TJ99	Uncharacterized protein. (170 aa)
	A0A0L9TJN8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
	A0A0L9TLR5	Uncharacterized protein. (155 aa)
	A0A0L9TMB2	MFAP1 domain-containing protein. (436 aa)
	A0A0L9TR06	G-patch domain-containing protein. (181 aa)
	A0A0L9TR70	Uncharacterized protein. (765 aa)
	A0A0L9TRB0	Tr-type G domain-containing protein. (986 aa)
	A0A0L9TTI5	Uncharacterized protein. (974 aa)
	A0A0L9TUC0	Uncharacterized protein. (520 aa)
	A0A0L9TUN7	Uncharacterized protein. (317 aa)
	A0A0L9TWM5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (204 aa)
	A0A0L9TWT9	zf-U1 domain-containing protein. (441 aa)
	A0A0L9TZM9	Uncharacterized protein. (137 aa)
	A0A0L9U070	DUF3700 domain-containing protein. (250 aa)
	A0A0L9U0B0	Uncharacterized protein. (239 aa)
	A0A0L9U235	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (152 aa)
	A0A0L9U2K3	Uncharacterized protein. (448 aa)
	A0A0L9U987	Sm domain-containing protein. (53 aa)
	A0A0L9U9P4	G-patch domain-containing protein. (319 aa)
	A0A0L9UH79	Uncharacterized protein. (211 aa)
	A0A0L9UK32	Uncharacterized protein. (608 aa)
	A0A0L9UL65	DUF3700 domain-containing protein. (254 aa)
	A0A0L9UPF8	Matrin-type domain-containing protein. (350 aa)
	A0A0L9UQZ7	RRM domain-containing protein. (424 aa)
	A0A0L9UTR9	Uncharacterized protein. (334 aa)
	A0A0L9UU98	Uncharacterized protein. (485 aa)
	A0A0L9UUG1	Small nuclear ribonucleoprotein-associated protein. (278 aa)
	A0A0L9UUV9	RRM domain-containing protein. (124 aa)
	A0A0L9UYF9	Uncharacterized protein. (116 aa)
	A0A0L9UYW8	Uncharacterized protein. (129 aa)
	A0A0L9V1C4	Uncharacterized protein. (999 aa)
	A0A0L9V644	Uncharacterized protein. (147 aa)
	A0A0L9V971	Uncharacterized protein. (346 aa)
	A0A0L9VDT9	Cir_N domain-containing protein. (419 aa)
	A0A0L9VEE6	Uncharacterized protein. (423 aa)
	A0A0L9VF39	SF3b1 domain-containing protein. (122 aa)
	A0A0L9VFA0	TOG domain-containing protein. (1261 aa)
	A0A0L9VFK7	TPR_REGION domain-containing protein. (918 aa)
	A0A0L9VGH3	PSP domain-containing protein. (575 aa)
	A0A0L9VLX6	G-patch domain-containing protein. (867 aa)
	A0A0L9VQI7	Uncharacterized protein. (163 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9T4S4	A0A0L9T7W1	SFM domain-containing protein.	Uncharacterized protein.	0.637
A0A0L9T4S4	A0A0L9T997	SFM domain-containing protein.	Uncharacterized protein.	0.825
A0A0L9T4S4	A0A0L9TE71	SFM domain-containing protein.	Uncharacterized protein.	0.420
A0A0L9T4S4	A0A0L9TGE2	SFM domain-containing protein.	Uncharacterized protein.	0.431
A0A0L9T4S4	A0A0L9TGX8	SFM domain-containing protein.	Uncharacterized protein.	0.431
A0A0L9T4S4	A0A0L9THT3	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.672
A0A0L9T4S4	A0A0L9TIB6	SFM domain-containing protein.	Uncharacterized protein.	0.547
A0A0L9T4S4	A0A0L9TJ99	SFM domain-containing protein.	Uncharacterized protein.	0.549
A0A0L9T4S4	A0A0L9TJN8	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.553
A0A0L9T4S4	A0A0L9TLR5	SFM domain-containing protein.	Uncharacterized protein.	0.591
A0A0L9T4S4	A0A0L9TR06	SFM domain-containing protein.	G-patch domain-containing protein.	0.509
A0A0L9T4S4	A0A0L9TR70	SFM domain-containing protein.	Uncharacterized protein.	0.509
A0A0L9T4S4	A0A0L9TRB0	SFM domain-containing protein.	Tr-type G domain-containing protein.	0.853
A0A0L9T4S4	A0A0L9TUC0	SFM domain-containing protein.	Uncharacterized protein.	0.591
A0A0L9T4S4	A0A0L9TUN7	SFM domain-containing protein.	Uncharacterized protein.	0.916
A0A0L9T4S4	A0A0L9TWM5	SFM domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.400
A0A0L9T4S4	A0A0L9TWT9	SFM domain-containing protein.	zf-U1 domain-containing protein.	0.400
A0A0L9T4S4	A0A0L9TZM9	SFM domain-containing protein.	Uncharacterized protein.	0.606
A0A0L9T4S4	A0A0L9U235	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.672
A0A0L9T4S4	A0A0L9U987	SFM domain-containing protein.	Sm domain-containing protein.	0.648