29 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9TDK4	Uncharacterized protein. (131 aa)
	A0A0L9TE71	Uncharacterized protein. (811 aa)
	A0A0L9TF55	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (99 aa)
	A0A0L9TH08	Uncharacterized protein. (506 aa)
	A0A0L9THT3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
	A0A0L9TIA2	Small nuclear ribonucleoprotein Sm D2. (82 aa)
	A0A0L9TJ99	Uncharacterized protein. (170 aa)
	A0A0L9TJN8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
	A0A0L9TQW8	CPSF_A domain-containing protein. (166 aa)
	A0A0L9TTC6	Uncharacterized protein. (123 aa)
	A0A0L9U179	CPSF_A domain-containing protein. (1214 aa)
	A0A0L9U235	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (152 aa)
	A0A0L9U4T4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A0L9U987	Sm domain-containing protein. (53 aa)
	A0A0L9U9W7	CPSF_A domain-containing protein. (1366 aa)
	A0A0L9UH79	Uncharacterized protein. (211 aa)
	A0A0L9UPF8	Matrin-type domain-containing protein. (350 aa)
	A0A0L9UUG1	Small nuclear ribonucleoprotein-associated protein. (278 aa)
	A0A0L9UUV9	RRM domain-containing protein. (124 aa)
	A0A0L9V469	C3H1-type domain-containing protein. (329 aa)
	A0A0L9V644	Uncharacterized protein. (147 aa)
	A0A0L9V8N6	Small nuclear ribonucleoprotein Sm D2. (102 aa)
	A0A0L9VCF9	Uncharacterized protein. (110 aa)
	A0A0L9VEE6	Uncharacterized protein. (423 aa)
	A0A0L9VF39	SF3b1 domain-containing protein. (122 aa)
	A0A0L9VFA0	TOG domain-containing protein. (1261 aa)
	A0A0L9VGH3	PSP domain-containing protein. (575 aa)
	A0A0L9VQ36	C3H1-type domain-containing protein. (361 aa)
	A0A0L9VQI7	Uncharacterized protein. (163 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9TDK4	A0A0L9TE71	Uncharacterized protein.	Uncharacterized protein.	0.947
A0A0L9TDK4	A0A0L9TF55	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.979
A0A0L9TDK4	A0A0L9TH08	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A0L9TDK4	A0A0L9THT3	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.963
A0A0L9TDK4	A0A0L9TIA2	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.982
A0A0L9TDK4	A0A0L9TJ99	Uncharacterized protein.	Uncharacterized protein.	0.935
A0A0L9TDK4	A0A0L9TJN8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.969
A0A0L9TDK4	A0A0L9TQW8	Uncharacterized protein.	CPSF_A domain-containing protein.	0.970
A0A0L9TDK4	A0A0L9TTC6	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A0L9TDK4	A0A0L9U179	Uncharacterized protein.	CPSF_A domain-containing protein.	0.996
A0A0L9TDK4	A0A0L9U235	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.963
A0A0L9TDK4	A0A0L9U4T4	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.979
A0A0L9TDK4	A0A0L9U987	Uncharacterized protein.	Sm domain-containing protein.	0.987
A0A0L9TDK4	A0A0L9U9W7	Uncharacterized protein.	CPSF_A domain-containing protein.	0.996
A0A0L9TDK4	A0A0L9UH79	Uncharacterized protein.	Uncharacterized protein.	0.935
A0A0L9TDK4	A0A0L9UPF8	Uncharacterized protein.	Matrin-type domain-containing protein.	0.989
A0A0L9TDK4	A0A0L9UUG1	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.935
A0A0L9TDK4	A0A0L9UUV9	Uncharacterized protein.	RRM domain-containing protein.	0.999
A0A0L9TDK4	A0A0L9V469	Uncharacterized protein.	C3H1-type domain-containing protein.	0.911
A0A0L9TDK4	A0A0L9V644	Uncharacterized protein.	Uncharacterized protein.	0.969