22 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9VF39	SF3b1 domain-containing protein. (122 aa)
	A0A0L9VQI7	Uncharacterized protein. (163 aa)
	A0A0L9VFA0	TOG domain-containing protein. (1261 aa)
	A0A0L9TE71	Uncharacterized protein. (811 aa)
	A0A0L9TIB6	Uncharacterized protein. (828 aa)
	A0A0L9TJ99	Uncharacterized protein. (170 aa)
	A0A0L9TTI5	Uncharacterized protein. (974 aa)
	A0A0L9TWM5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (204 aa)
	A0A0L9TWT9	zf-U1 domain-containing protein. (441 aa)
	A0A0L9U070	DUF3700 domain-containing protein. (250 aa)
	A0A0L9U0B0	Uncharacterized protein. (239 aa)
	A0A0L9U2K3	Uncharacterized protein. (448 aa)
	A0A0L9U987	Sm domain-containing protein. (53 aa)
	A0A0L9UH79	Uncharacterized protein. (211 aa)
	A0A0L9UK32	Uncharacterized protein. (608 aa)
	A0A0L9UL65	DUF3700 domain-containing protein. (254 aa)
	A0A0L9UPF8	Matrin-type domain-containing protein. (350 aa)
	A0A0L9UQZ7	RRM domain-containing protein. (424 aa)
	A0A0L9UUG1	Small nuclear ribonucleoprotein-associated protein. (278 aa)
	A0A0L9V1C4	Uncharacterized protein. (999 aa)
	A0A0L9V971	Uncharacterized protein. (346 aa)
	A0A0L9VEE6	Uncharacterized protein. (423 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9TE71	A0A0L9TIB6	Uncharacterized protein.	Uncharacterized protein.	0.597
A0A0L9TE71	A0A0L9TJ99	Uncharacterized protein.	Uncharacterized protein.	0.783
A0A0L9TE71	A0A0L9TWM5	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.630
A0A0L9TE71	A0A0L9TWT9	Uncharacterized protein.	zf-U1 domain-containing protein.	0.630
A0A0L9TE71	A0A0L9U0B0	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0L9TE71	A0A0L9U2K3	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A0L9TE71	A0A0L9U987	Uncharacterized protein.	Sm domain-containing protein.	0.918
A0A0L9TE71	A0A0L9UH79	Uncharacterized protein.	Uncharacterized protein.	0.783
A0A0L9TE71	A0A0L9UPF8	Uncharacterized protein.	Matrin-type domain-containing protein.	0.996
A0A0L9TE71	A0A0L9UQZ7	Uncharacterized protein.	RRM domain-containing protein.	0.438
A0A0L9TE71	A0A0L9UUG1	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.783
A0A0L9TE71	A0A0L9V1C4	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0L9TE71	A0A0L9V971	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A0L9TE71	A0A0L9VF39	Uncharacterized protein.	SF3b1 domain-containing protein.	0.911
A0A0L9TE71	A0A0L9VFA0	Uncharacterized protein.	TOG domain-containing protein.	0.911
A0A0L9TE71	A0A0L9VQI7	Uncharacterized protein.	Uncharacterized protein.	0.783
A0A0L9TIB6	A0A0L9TE71	Uncharacterized protein.	Uncharacterized protein.	0.597
A0A0L9TIB6	A0A0L9TJ99	Uncharacterized protein.	Uncharacterized protein.	0.770
A0A0L9TIB6	A0A0L9TWM5	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.914
A0A0L9TIB6	A0A0L9TWT9	Uncharacterized protein.	zf-U1 domain-containing protein.	0.914