28 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9TF55	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (99 aa)
	A0A0L9TDK4	Uncharacterized protein. (131 aa)
	A0A0L9TDV7	Uncharacterized protein. (513 aa)
	A0A0L9THT3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
	A0A0L9TIA2	Small nuclear ribonucleoprotein Sm D2. (82 aa)
	A0A0L9TJN8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
	A0A0L9TR38	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	A0A0L9TTC6	Uncharacterized protein. (123 aa)
	A0A0L9TVP5	Matrin-type domain-containing protein. (237 aa)
	A0A0L9TY39	Uncharacterized protein. (160 aa)
	A0A0L9TZB1	PRP38_assoc domain-containing protein. (388 aa)
	A0A0L9U235	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (152 aa)
	A0A0L9U4T4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A0L9U8A3	Sm domain-containing protein. (55 aa)
	A0A0L9U987	Sm domain-containing protein. (53 aa)
	A0A0L9UT28	Uncharacterized protein. (73 aa)
	A0A0L9UUV9	RRM domain-containing protein. (124 aa)
	A0A0L9UVH7	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (159 aa)
	A0A0L9UWE1	PRP38_assoc domain-containing protein. (446 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A0L9V469	C3H1-type domain-containing protein. (329 aa)
	A0A0L9V644	Uncharacterized protein. (147 aa)
	A0A0L9V8N6	Small nuclear ribonucleoprotein Sm D2. (102 aa)
	A0A0L9VC76	Uncharacterized protein. (929 aa)
	A0A0L9VCF9	Uncharacterized protein. (110 aa)
	A0A0L9VGH3	PSP domain-containing protein. (575 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
	A0A0L9VQ36	C3H1-type domain-containing protein. (361 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0L9TDK4	A0A0L9TDV7	A0A0L9TDK4	A0A0L9TDV7	Uncharacterized protein.	Uncharacterized protein.	0.660
A0A0L9TDK4	A0A0L9TF55	A0A0L9TDK4	A0A0L9TF55	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.979
A0A0L9TDK4	A0A0L9THT3	A0A0L9TDK4	A0A0L9THT3	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.963
A0A0L9TDK4	A0A0L9TIA2	A0A0L9TDK4	A0A0L9TIA2	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.982
A0A0L9TDK4	A0A0L9TJN8	A0A0L9TDK4	A0A0L9TJN8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.969
A0A0L9TDK4	A0A0L9TR38	A0A0L9TDK4	A0A0L9TR38	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.526
A0A0L9TDK4	A0A0L9TTC6	A0A0L9TDK4	A0A0L9TTC6	Uncharacterized protein.	Uncharacterized protein.	0.983
A0A0L9TDK4	A0A0L9TVP5	A0A0L9TDK4	A0A0L9TVP5	Uncharacterized protein.	Matrin-type domain-containing protein.	0.648
A0A0L9TDK4	A0A0L9TY39	A0A0L9TDK4	A0A0L9TY39	Uncharacterized protein.	Uncharacterized protein.	0.545
A0A0L9TDK4	A0A0L9TZB1	A0A0L9TDK4	A0A0L9TZB1	Uncharacterized protein.	PRP38_assoc domain-containing protein.	0.545
A0A0L9TDK4	A0A0L9U235	A0A0L9TDK4	A0A0L9U235	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.963
A0A0L9TDK4	A0A0L9U4T4	A0A0L9TDK4	A0A0L9U4T4	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.979
A0A0L9TDK4	A0A0L9U8A3	A0A0L9TDK4	A0A0L9U8A3	Uncharacterized protein.	Sm domain-containing protein.	0.918
A0A0L9TDK4	A0A0L9U987	A0A0L9TDK4	A0A0L9U987	Uncharacterized protein.	Sm domain-containing protein.	0.987
A0A0L9TDK4	A0A0L9UT28	A0A0L9TDK4	A0A0L9UT28	Uncharacterized protein.	Uncharacterized protein.	0.545
A0A0L9TDK4	A0A0L9UUV9	A0A0L9TDK4	A0A0L9UUV9	Uncharacterized protein.	RRM domain-containing protein.	0.999
A0A0L9TDK4	A0A0L9UVH7	A0A0L9TDK4	A0A0L9UVH7	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.526
A0A0L9TDK4	A0A0L9V469	A0A0L9TDK4	A0A0L9V469	Uncharacterized protein.	C3H1-type domain-containing protein.	0.911
A0A0L9TDK4	A0A0L9V644	A0A0L9TDK4	A0A0L9V644	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A0L9TDK4	A0A0L9V8N6	A0A0L9TDK4	A0A0L9V8N6	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.982