34 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9T4S4	SFM domain-containing protein. (410 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (87 aa)
	A0A0L9TAT7	Uncharacterized protein. (863 aa)
	A0A0L9TF55	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (99 aa)
	A0A0L9THT3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
	A0A0L9TIA2	Small nuclear ribonucleoprotein Sm D2. (82 aa)
	A0A0L9TJ99	Uncharacterized protein. (170 aa)
	A0A0L9TJN8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
	A0A0L9TR38	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	A0A0L9TRB0	Tr-type G domain-containing protein. (986 aa)
	A0A0L9TVL9	WD_REPEATS_REGION domain-containing protein. (566 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (90 aa)
	A0A0L9TZ14	Uncharacterized protein. (151 aa)
	A0A0L9U1A6	Uncharacterized protein. (839 aa)
	A0A0L9U235	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (152 aa)
	A0A0L9U2X8	Sm domain-containing protein. (91 aa)
	A0A0L9U4T4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A0L9U659	Nop domain-containing protein. (505 aa)
	A0A0L9U8A3	Sm domain-containing protein. (55 aa)
	A0A0L9U987	Sm domain-containing protein. (53 aa)
	A0A0L9U9R1	U1-type domain-containing protein. (237 aa)
	LSM4-2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (148 aa)
	A0A0L9UH79	Uncharacterized protein. (211 aa)
	A0A0L9UMW8	Uncharacterized protein. (1039 aa)
	A0A0L9UU99	Uncharacterized protein. (104 aa)
	A0A0L9UUG1	Small nuclear ribonucleoprotein-associated protein. (278 aa)
	A0A0L9UVH7	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (159 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A0L9V4L7	Uncharacterized protein. (682 aa)
	A0A0L9V644	Uncharacterized protein. (147 aa)
	A0A0L9V856	Uncharacterized protein. (142 aa)
	A0A0L9V8N6	Small nuclear ribonucleoprotein Sm D2. (102 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
	A0A0L9VQI7	Uncharacterized protein. (163 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0L9T4S4	A0A0L9TF55	A0A0L9T4S4	A0A0L9TF55	SFM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.732
A0A0L9T4S4	A0A0L9THT3	A0A0L9T4S4	A0A0L9THT3	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.672
A0A0L9T4S4	A0A0L9TIA2	A0A0L9T4S4	A0A0L9TIA2	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.649
A0A0L9T4S4	A0A0L9TJ99	A0A0L9T4S4	A0A0L9TJ99	SFM domain-containing protein.	Uncharacterized protein.	0.549
A0A0L9T4S4	A0A0L9TJN8	A0A0L9T4S4	A0A0L9TJN8	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.553
A0A0L9T4S4	A0A0L9TRB0	A0A0L9T4S4	A0A0L9TRB0	SFM domain-containing protein.	Tr-type G domain-containing protein.	0.853
A0A0L9T4S4	A0A0L9U235	A0A0L9T4S4	A0A0L9U235	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.672
A0A0L9T4S4	A0A0L9U2X8	A0A0L9T4S4	A0A0L9U2X8	SFM domain-containing protein.	Sm domain-containing protein.	0.536
A0A0L9T4S4	A0A0L9U4T4	A0A0L9T4S4	A0A0L9U4T4	SFM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.732
A0A0L9T4S4	A0A0L9U659	A0A0L9T4S4	A0A0L9U659	SFM domain-containing protein.	Nop domain-containing protein.	0.541
A0A0L9T4S4	A0A0L9U987	A0A0L9T4S4	A0A0L9U987	SFM domain-containing protein.	Sm domain-containing protein.	0.648
A0A0L9T4S4	A0A0L9UH79	A0A0L9T4S4	A0A0L9UH79	SFM domain-containing protein.	Uncharacterized protein.	0.549
A0A0L9T4S4	A0A0L9UMW8	A0A0L9T4S4	A0A0L9UMW8	SFM domain-containing protein.	Uncharacterized protein.	0.557
A0A0L9T4S4	A0A0L9UUG1	A0A0L9T4S4	A0A0L9UUG1	SFM domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.549
A0A0L9T4S4	A0A0L9V644	A0A0L9T4S4	A0A0L9V644	SFM domain-containing protein.	Uncharacterized protein.	0.553
A0A0L9T4S4	A0A0L9V8N6	A0A0L9T4S4	A0A0L9V8N6	SFM domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.649
A0A0L9T4S4	A0A0L9VQI7	A0A0L9T4S4	A0A0L9VQI7	SFM domain-containing protein.	Uncharacterized protein.	0.549
A0A0L9T4S4	LSM3	A0A0L9T4S4	A0A0L9VK45	SFM domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.441
A0A0L9TAT7	A0A0L9TF55	A0A0L9TAT7	A0A0L9TF55	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.927
A0A0L9TAT7	A0A0L9THT3	A0A0L9TAT7	A0A0L9THT3	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.869