10 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9U2K3	Uncharacterized protein. (448 aa)
	A0A0L9T6N6	RRM domain-containing protein. (109 aa)
	A0A0L9T795	Uncharacterized protein. (401 aa)
	A0A0L9TEZ7	Sm domain-containing protein. (61 aa)
	A0A0L9U0B0	Uncharacterized protein. (239 aa)
	A0A0L9UGK2	Sm domain-containing protein. (66 aa)
	A0A0L9UNN7	Uncharacterized protein. (421 aa)
	A0A0L9UQZ7	RRM domain-containing protein. (424 aa)
	A0A0L9V1C4	Uncharacterized protein. (999 aa)
	A0A0L9V971	Uncharacterized protein. (346 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9T6N6	A0A0L9UQZ7	RRM domain-containing protein.	RRM domain-containing protein.	0.424
A0A0L9T795	A0A0L9UQZ7	Uncharacterized protein.	RRM domain-containing protein.	0.422
A0A0L9TEZ7	A0A0L9U0B0	Sm domain-containing protein.	Uncharacterized protein.	0.615
A0A0L9TEZ7	A0A0L9U2K3	Sm domain-containing protein.	Uncharacterized protein.	0.803
A0A0L9TEZ7	A0A0L9UGK2	Sm domain-containing protein.	Sm domain-containing protein.	0.902
A0A0L9TEZ7	A0A0L9UQZ7	Sm domain-containing protein.	RRM domain-containing protein.	0.894
A0A0L9TEZ7	A0A0L9V1C4	Sm domain-containing protein.	Uncharacterized protein.	0.615
A0A0L9TEZ7	A0A0L9V971	Sm domain-containing protein.	Uncharacterized protein.	0.803
A0A0L9U0B0	A0A0L9TEZ7	Uncharacterized protein.	Sm domain-containing protein.	0.615
A0A0L9U0B0	A0A0L9U2K3	Uncharacterized protein.	Uncharacterized protein.	0.740
A0A0L9U0B0	A0A0L9UGK2	Uncharacterized protein.	Sm domain-containing protein.	0.615
A0A0L9U0B0	A0A0L9UQZ7	Uncharacterized protein.	RRM domain-containing protein.	0.696
A0A0L9U0B0	A0A0L9V1C4	Uncharacterized protein.	Uncharacterized protein.	0.906
A0A0L9U0B0	A0A0L9V971	Uncharacterized protein.	Uncharacterized protein.	0.740
A0A0L9U2K3	A0A0L9TEZ7	Uncharacterized protein.	Sm domain-containing protein.	0.803
A0A0L9U2K3	A0A0L9U0B0	Uncharacterized protein.	Uncharacterized protein.	0.740
A0A0L9U2K3	A0A0L9UGK2	Uncharacterized protein.	Sm domain-containing protein.	0.803
A0A0L9U2K3	A0A0L9UQZ7	Uncharacterized protein.	RRM domain-containing protein.	0.820
A0A0L9U2K3	A0A0L9V1C4	Uncharacterized protein.	Uncharacterized protein.	0.740
A0A0L9U2K3	A0A0L9V971	Uncharacterized protein.	Uncharacterized protein.	0.407