56 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0L9TXF2	HATPase_c domain-containing protein. (604 aa)
	A0A0L9TT45	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (202 aa)
	A0A0L9TSC3	Uncharacterized protein. (424 aa)
	A0A0L9TRB0	Tr-type G domain-containing protein. (986 aa)
	A0A0L9TR12	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (779 aa)
	A0A0L9TQS6	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (863 aa)
	A0A0L9TKB8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (301 aa)
	A0A0L9TIA8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (176 aa)
	A0A0L9TGT5	Uncharacterized protein. (272 aa)
	A0A0L9TET0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (492 aa)
	A0A0L9TAA0	RNase_PH domain-containing protein. (215 aa)
	A0A0L9T9R0	Uncharacterized protein. (293 aa)
	A0A0L9T8K3	Uncharacterized protein. (367 aa)
	A0A0L9T8C3	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (271 aa)
	A0A0L9VL69	RNase_PH domain-containing protein. (267 aa)
	A0A0L9VLK4	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (159 aa)
	A0A0L9VPC5	Uncharacterized protein. (1016 aa)
	A0A0L9VQG2	GHMP_kinases_N domain-containing protein. (356 aa)
	A0A0L9VUG8	Uncharacterized protein. (294 aa)
	A0A0L9U026	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (276 aa)
	A0A0L9U1T7	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (420 aa)
	A0A0L9U698	EFG_IV domain-containing protein. (367 aa)
	A0A0L9U768	S1 motif domain-containing protein. (928 aa)
	A0A0L9U7W2	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (708 aa)
	A0A0L9UFQ4	Uncharacterized protein. (508 aa)
	A0A0L9UI94	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1480 aa)
	A0A0L9UIU6	Tr-type G domain-containing protein. (831 aa)
	A0A0L9UJ53	DNA_mis_repair domain-containing protein. (718 aa)
	A0A0L9UJ87	Tr-type G domain-containing protein. (822 aa)
	TOP6B	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (672 aa)
	A0A0L9UP55	RECA_2 domain-containing protein; Belongs to the peptidase M16 family. (1011 aa)
	A0A0L9UPM6	RECA_2 domain-containing protein. (661 aa)
	A0A0L9UQX8	Uncharacterized protein. (1286 aa)
	A0A0L9UT74	HATPase_c domain-containing protein. (787 aa)
	A0A0L9UTC1	Uncharacterized protein. (83 aa)
	A0A0L9UTQ7	Tr-type G domain-containing protein. (1026 aa)
	A0A0L9UTT4	Uncharacterized protein. (168 aa)
	A0A0L9UU37	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (271 aa)
	A0A0L9UUC2	HATPase_c domain-containing protein. (761 aa)
	A0A0L9UUF8	HATPase_c domain-containing protein. (699 aa)
	A0A0L9UUY5	HATPase_c domain-containing protein. (817 aa)
	A0A0L9UUZ1	Uncharacterized protein. (261 aa)
	A0A0L9UXT8	UPF0029 domain-containing protein. (234 aa)
	A0A0L9UZJ7	RNase_PH domain-containing protein. (149 aa)
	A0A0L9UZX1	Uncharacterized protein. (996 aa)
	A0A0L9V1U0	HATPase_c domain-containing protein. (816 aa)
	A0A0L9V6H5	Uncharacterized protein. (254 aa)
	A0A0L9V802	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (410 aa)
	A0A0L9VAE0	GHMP_kinases_N domain-containing protein. (202 aa)
	A0A0L9VDK6	Uncharacterized protein. (1064 aa)
	A0A0L9VDY4	Mevalonate kinase. (382 aa)
	A0A0L9VH64	Uncharacterized protein. (933 aa)
	A0A0L9VJA8	Uncharacterized protein. (397 aa)
	A0A0L9VJF0	HATPase_c domain-containing protein. (699 aa)
	A0A0L9TZ89	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1039 aa)
	A0A0L9TU18	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (269 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9T8C3	A0A0L9TAA0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	RNase_PH domain-containing protein.	0.519
A0A0L9T8C3	A0A0L9TIA8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.961
A0A0L9T8C3	A0A0L9TR12	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.687
A0A0L9T8C3	A0A0L9TRB0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.673
A0A0L9T8C3	A0A0L9TT45	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.901
A0A0L9T8C3	A0A0L9U698	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	EFG_IV domain-containing protein.	0.746
A0A0L9T8C3	A0A0L9UIU6	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.855
A0A0L9T8C3	A0A0L9UJ87	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.826
A0A0L9T8C3	A0A0L9UTQ7	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Tr-type G domain-containing protein.	0.673
A0A0L9T8C3	A0A0L9UU37	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.900
A0A0L9T8C3	A0A0L9UUZ1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.535
A0A0L9T8C3	A0A0L9V802	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.901
A0A0L9T8K3	A0A0L9TU18	Uncharacterized protein.	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	0.438
A0A0L9T8K3	A0A0L9U026	Uncharacterized protein.	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	0.438
A0A0L9T8K3	A0A0L9UFQ4	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A0L9T8K3	A0A0L9VAE0	Uncharacterized protein.	GHMP_kinases_N domain-containing protein.	0.404
A0A0L9T8K3	A0A0L9VDY4	Uncharacterized protein.	Mevalonate kinase.	0.404
A0A0L9T9R0	A0A0L9TAA0	Uncharacterized protein.	RNase_PH domain-containing protein.	0.975
A0A0L9T9R0	A0A0L9TIA8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.471
A0A0L9T9R0	A0A0L9UUZ1	Uncharacterized protein.	Uncharacterized protein.	0.975