19 items (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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experimentally determined

Predicted Interactions

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Your Input:
	LSM1-2	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (148 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (87 aa)
	A0A0L9TEZ7	Sm domain-containing protein. (61 aa)
	A0A0L9TF55	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (99 aa)
	A0A0L9THT3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
	A0A0L9TIA2	Small nuclear ribonucleoprotein Sm D2. (82 aa)
	A0A0L9TJN8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (90 aa)
	A0A0L9U235	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (152 aa)
	A0A0L9U2X8	Sm domain-containing protein. (91 aa)
	A0A0L9U4T4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A0L9U987	Sm domain-containing protein. (53 aa)
	LSM4-2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (148 aa)
	A0A0L9UGK2	Sm domain-containing protein. (66 aa)
	A0A0L9UUG1	Small nuclear ribonucleoprotein-associated protein. (278 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A0L9V5J1	Sm domain-containing protein. (99 aa)
	A0A0L9V8N6	Small nuclear ribonucleoprotein Sm D2. (102 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0L9TEZ7	A0A0L9TF55	A0A0L9TEZ7	A0A0L9TF55	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.989
A0A0L9TEZ7	A0A0L9THT3	A0A0L9TEZ7	A0A0L9THT3	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.988
A0A0L9TEZ7	A0A0L9TIA2	A0A0L9TEZ7	A0A0L9TIA2	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.989
A0A0L9TEZ7	A0A0L9TJN8	A0A0L9TEZ7	A0A0L9TJN8	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.998
A0A0L9TEZ7	A0A0L9U235	A0A0L9TEZ7	A0A0L9U235	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.998
A0A0L9TEZ7	A0A0L9U2X8	A0A0L9TEZ7	A0A0L9U2X8	Sm domain-containing protein.	Sm domain-containing protein.	0.952
A0A0L9TEZ7	A0A0L9U4T4	A0A0L9TEZ7	A0A0L9U4T4	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
A0A0L9TEZ7	A0A0L9U987	A0A0L9TEZ7	A0A0L9U987	Sm domain-containing protein.	Sm domain-containing protein.	0.999
A0A0L9TEZ7	A0A0L9UGK2	A0A0L9TEZ7	A0A0L9UGK2	Sm domain-containing protein.	Sm domain-containing protein.	0.902
A0A0L9TEZ7	A0A0L9UUG1	A0A0L9TEZ7	A0A0L9UUG1	Sm domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.991
A0A0L9TEZ7	A0A0L9V5J1	A0A0L9TEZ7	A0A0L9V5J1	Sm domain-containing protein.	Sm domain-containing protein.	0.973
A0A0L9TEZ7	A0A0L9V8N6	A0A0L9TEZ7	A0A0L9V8N6	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.998
A0A0L9TEZ7	LSM1-2	A0A0L9TEZ7	A0A0L9VQM5	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.512
A0A0L9TEZ7	LSM3	A0A0L9TEZ7	A0A0L9VK45	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.973
A0A0L9TEZ7	LSM4	A0A0L9TEZ7	A0A0L9TWL1	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.912
A0A0L9TEZ7	LSM4-2	A0A0L9TEZ7	A0A0L9UA85	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.912
A0A0L9TEZ7	LSM5	A0A0L9TEZ7	A0A0L9T5R1	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.974
A0A0L9TEZ7	LSM8	A0A0L9TEZ7	A0A0L9V1W8	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.970
A0A0L9TF55	A0A0L9TEZ7	A0A0L9TF55	A0A0L9TEZ7	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Sm domain-containing protein.	0.989
A0A0L9TF55	A0A0L9THT3	A0A0L9TF55	A0A0L9THT3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.982