Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM83237.1 | EDM83238.1 | LMED105_10000 | LMED105_10005 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.867 |
| EDM83237.1 | EDM83239.1 | LMED105_10000 | LMED105_10010 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Hydratase/decarboxylase; COG3971 2-keto-4-pentenoate hydratase. | 0.829 |
| EDM83237.1 | EDM83240.1 | LMED105_10000 | LMED105_10015 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.815 |
| EDM83237.1 | EDM83241.1 | LMED105_10000 | LMED105_10020 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 4-hydroxy-2-ketovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.764 |
| EDM83237.1 | EDM83242.1 | LMED105_10000 | LMED105_10025 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Hydratase/decarboxylase; COG3971 2-keto-4-pentenoate hydratase. | 0.786 |
| EDM83237.1 | EDM83243.1 | LMED105_10000 | LMED105_10030 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog. | 0.812 |
| EDM83237.1 | EDM83244.1 | LMED105_10000 | LMED105_10035 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Glycosyl hydrolase, BNR repeat; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor. | 0.450 |
| EDM83237.1 | EDM83245.1 | LMED105_10000 | LMED105_10040 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein; COG1033 Predicted exporters of the RND superfamily. | 0.450 |
| EDM83237.1 | EDM83246.1 | LMED105_10000 | LMED105_10045 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.452 |
| EDM83237.1 | EDM83247.1 | LMED105_10000 | LMED105_10050 | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.454 |
| EDM83238.1 | EDM83237.1 | LMED105_10005 | LMED105_10000 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.867 |
| EDM83238.1 | EDM83239.1 | LMED105_10005 | LMED105_10010 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hydratase/decarboxylase; COG3971 2-keto-4-pentenoate hydratase. | 0.969 |
| EDM83238.1 | EDM83240.1 | LMED105_10005 | LMED105_10015 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.913 |
| EDM83238.1 | EDM83241.1 | LMED105_10005 | LMED105_10020 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 4-hydroxy-2-ketovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.899 |
| EDM83238.1 | EDM83242.1 | LMED105_10005 | LMED105_10025 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hydratase/decarboxylase; COG3971 2-keto-4-pentenoate hydratase. | 0.960 |
| EDM83238.1 | EDM83243.1 | LMED105_10005 | LMED105_10030 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog. | 0.716 |
| EDM83238.1 | EDM83244.1 | LMED105_10005 | LMED105_10035 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Glycosyl hydrolase, BNR repeat; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor. | 0.650 |
| EDM83238.1 | EDM83245.1 | LMED105_10005 | LMED105_10040 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein; COG1033 Predicted exporters of the RND superfamily. | 0.665 |
| EDM83238.1 | EDM83246.1 | LMED105_10005 | LMED105_10045 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein. | 0.675 |
| EDM83238.1 | EDM83247.1 | LMED105_10005 | LMED105_10050 | COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein. | 0.700 |
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