Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM82731.1 | EDM83887.1 | LMED105_11705 | LMED105_08660 | Aminotransferase, class I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.420 |
| EDM82731.1 | hisC | LMED105_11705 | LMED105_06242 | Aminotransferase, class I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.597 |
| EDM82731.1 | hisC-2 | LMED105_11705 | LMED105_15379 | Aminotransferase, class I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.558 |
| EDM82827.1 | EDM83887.1 | LMED105_16238 | LMED105_08660 | Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.420 |
| EDM82827.1 | hisC | LMED105_16238 | LMED105_06242 | Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.488 |
| EDM82827.1 | hisC-2 | LMED105_16238 | LMED105_15379 | Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.468 |
| EDM82841.1 | EDM83275.1 | LMED105_10195 | LMED105_10190 | Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity. | 0.976 |
| EDM83240.1 | EDM83241.1 | LMED105_10015 | LMED105_10020 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 4-hydroxy-2-ketovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.999 |
| EDM83241.1 | EDM83240.1 | LMED105_10020 | LMED105_10015 | 4-hydroxy-2-ketovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.999 |
| EDM83275.1 | EDM82841.1 | LMED105_10190 | LMED105_10195 | Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity. | Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.976 |
| EDM83887.1 | EDM82731.1 | LMED105_08660 | LMED105_11705 | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | Aminotransferase, class I and II; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.420 |
| EDM83887.1 | EDM82827.1 | LMED105_08660 | LMED105_16238 | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.420 |
| EDM83887.1 | EDM84644.1 | LMED105_08660 | LMED105_03827 | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | Putative oxidoreductase; COG1231 Monoamine oxidase. | 0.500 |
| EDM83887.1 | hisC | LMED105_08660 | LMED105_06242 | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.647 |
| EDM83887.1 | hisC-2 | LMED105_08660 | LMED105_15379 | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.647 |
| EDM83981.1 | EDM84214.1 | LMED105_13433 | LMED105_01588 | Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. | 6-aminohexanoate-cyclic-dimer hydrolase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. | 0.716 |
| EDM83981.1 | EDM84644.1 | LMED105_13433 | LMED105_03827 | Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. | Putative oxidoreductase; COG1231 Monoamine oxidase. | 0.462 |
| EDM84214.1 | EDM83981.1 | LMED105_01588 | LMED105_13433 | 6-aminohexanoate-cyclic-dimer hydrolase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. | Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. | 0.716 |
| EDM84644.1 | EDM83887.1 | LMED105_03827 | LMED105_08660 | Putative oxidoreductase; COG1231 Monoamine oxidase. | Probable D-amino acid dehydrogenase subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.500 |
| EDM84644.1 | EDM83981.1 | LMED105_03827 | LMED105_13433 | Putative oxidoreductase; COG1231 Monoamine oxidase. | Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family. | 0.462 |
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