(86 nodes) Cytosolic large ribosomal subunit network (Vigna radiata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106771030	60S ribosomal protein L22-2. (147 aa)
	LOC106771052	60S ribosomal protein L35. (123 aa)
	LOC106770917	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	LOC106770996	60S ribosomal protein L35. (123 aa)
	LOC106771028	Probable 60S ribosomal protein L14. (133 aa)
	LOC106771004	60S ribosomal protein L7a-1. (257 aa)
	LOC106770768	60S ribosomal protein L5-2. (300 aa)
	LOC106770781	60S ribosomal protein L18. (187 aa)
	LOC106768937	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (207 aa)
	LOC106767639	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (61 aa)
	LOC106767278	60S ribosomal protein L31. (120 aa)
	LOC106767060	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	LOC106766887	60S ribosomal protein L34. (120 aa)
	LOC106766868	60S ribosomal protein L35a-3. (112 aa)
	LOC106766205	60S ribosomal protein L35a-1-like. (108 aa)
	LOC106765964	60S ribosomal protein L30. (112 aa)
	LOC106765650	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	LOC106765448	60S ribosomal protein L32-1. (133 aa)
	LOC106765127	60S ribosomal protein L31. (120 aa)
	LOC106763942	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (207 aa)
	LOC106763582	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (110 aa)
	LOC106763543	60S ribosomal protein L9. (193 aa)
	LOC106763422	60S ribosomal protein L7a-1-like. (154 aa)
	LOC106762948	60S ribosomal protein L35a-1. (112 aa)
	LOC106762378	BTB/POZ domain-containing protein At1g04390 isoform X1. (1009 aa)
	LOC106761544	60S ribosomal protein L39. (51 aa)
	LOC106761267	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	LOC106761209	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	LOC106761136	60S ribosomal protein L27a-3-like; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	LOC106761064	60S ribosomal protein L32-1-like. (133 aa)
	LOC106760879	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)
	LOC106760851	60S ribosomal protein L28-2. (150 aa)
	LOC106760796	60S ribosomal protein L7-4. (268 aa)
	LOC106760726	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (181 aa)
	LOC106760230	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (61 aa)
	LOC106759783	60S ribosomal protein L6. (232 aa)
	LOC106758852	Ribosomal protein L37; Binds to the 23S rRNA. (95 aa)
	LOC106758798	Probable ribosome biogenesis protein RLP24. (166 aa)
	LOC106758762	60S ribosomal protein L34. (120 aa)
	LOC106758718	60S ribosomal protein L30. (112 aa)
	LOC106758715	60S ribosomal protein L32-1. (133 aa)
	LOC106758732	60S ribosomal protein L35. (123 aa)
	LOC106758587	60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family. (199 aa)
	LOC106758154	60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family. (155 aa)
	LOC106758138	60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family. (206 aa)
	LOC106757201	60S ribosomal protein L21-2. (164 aa)
	LOC106757124	60S ribosomal protein L18. (187 aa)
	LOC106757076	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (209 aa)
	LOC106756677	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (210 aa)
	LOC106756665	60S ribosomal protein L4-like. (402 aa)
	LOC106756341	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (208 aa)
	LOC106755565	60S ribosomal protein L17-2; Belongs to the universal ribosomal protein uL22 family. (181 aa)
	LOC106755420	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (205 aa)
	LOC106755226	60S ribosomal protein L21-2-like. (165 aa)
	LOC106754155	60S ribosomal protein L7a-1 isoform X1. (261 aa)
	LOC106754421	60S ribosomal protein L4. (405 aa)
	LOC106754691	60S ribosomal protein L9-like. (136 aa)
	LOC106754699	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	LOC111242700	60S ribosomal protein L35-like. (105 aa)
	LOC111241965	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (91 aa)
	LOC106778459	60S ribosomal protein L38 isoform X1; Belongs to the eukaryotic ribosomal protein eL38 family. (81 aa)
	LOC106753779	60S ribosomal protein L7-1. (236 aa)
	LOC106780207	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (181 aa)
	LOC106779330	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)
	LOC106778544	60S ribosomal protein L5-2-like. (300 aa)
	LOC106778174	Uncharacterized protein LOC106778174. (166 aa)
	LOC106776919	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (207 aa)
	LOC106777038	60S ribosomal protein L27a-3; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	LOC106752625	60S ribosomal protein L7-2 isoform X1. (246 aa)
	LOC106777030	60S ribosomal protein L26-1. (146 aa)
	LOC106776912	60S ribosomal protein L34. (120 aa)
	LOC106776413	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	LOC106775228	60S ribosomal protein L22-2. (124 aa)
	LOC106775255	60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (105 aa)
	LOC106775122	60S ribosomal protein L18-3. (187 aa)
	LOC106775154	60S ribosomal protein L26-1-like. (146 aa)
	LOC106774294	60S ribosomal protein L5-2. (299 aa)
	LOC106773875	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (154 aa)
	LOC106773864	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (233 aa)
	LOC106773736	60S ribosomal protein L37a. (92 aa)
	LOC106773004	60S ribosomal protein L28-2. (150 aa)
	LOC106771160	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (110 aa)
	LOC106771142	Probable 60S ribosomal protein L14. (132 aa)
	LOC106771114	60S ribosomal protein L22-2. (124 aa)
	LOC106753293	60S ribosomal protein L27a-3; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	LOC106753478	60S ribosomal protein L17-2; Belongs to the universal ribosomal protein uL22 family. (181 aa)

Your Current Organism:

Vigna radiata

NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106752625	LOC106753293	A0A1S3T7U0	A0A1S3T9Y4	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L27a-3; Belongs to the universal ribosomal protein uL15 family.	0.943
LOC106752625	LOC106753478	A0A1S3T7U0	A0A1S3TAJ2	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L17-2; Belongs to the universal ribosomal protein uL22 family.	0.973
LOC106752625	LOC106753779	A0A1S3T7U0	A0A1S3TBH5	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L7-1.	0.904
LOC106752625	LOC106754155	A0A1S3T7U0	A0A1S3TCY5	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L7a-1 isoform X1.	0.906
LOC106752625	LOC106754421	A0A1S3T7U0	A0A1S3TDS0	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L4.	0.972
LOC106752625	LOC106754691	A0A1S3T7U0	A0A1S3TEN6	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L9-like.	0.972
LOC106752625	LOC106754699	A0A1S3T7U0	A0A1S3TEP3	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.954
LOC106752625	LOC106755226	A0A1S3T7U0	A0A1S3TGD0	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L21-2-like.	0.971
LOC106752625	LOC106755420	A0A1S3T7U0	A0A1S3TH20	60S ribosomal protein L7-2 isoform X1.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.951
LOC106752625	LOC106755565	A0A1S3T7U0	A0A1S3THI9	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L17-2; Belongs to the universal ribosomal protein uL22 family.	0.973
LOC106752625	LOC106756341	A0A1S3T7U0	A0A1S3TKB6	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.938
LOC106752625	LOC106756665	A0A1S3T7U0	A0A1S3TLL9	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L4-like.	0.972
LOC106752625	LOC106756677	A0A1S3T7U0	A0A1S3TLN2	60S ribosomal protein L7-2 isoform X1.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.951
LOC106752625	LOC106757076	A0A1S3T7U0	A0A1S3TN14	60S ribosomal protein L7-2 isoform X1.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.951
LOC106752625	LOC106757124	A0A1S3T7U0	A0A1S3TN54	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L18.	0.923
LOC106752625	LOC106757201	A0A1S3T7U0	A0A1S3TND5	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L21-2.	0.971
LOC106752625	LOC106758138	A0A1S3T7U0	A0A1S3TRY8	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family.	0.972
LOC106752625	LOC106758154	A0A1S3T7U0	A0A1S3TS28	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.	0.938
LOC106752625	LOC106758587	A0A1S3T7U0	A0A1S3TTB6	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.	0.938
LOC106752625	LOC106758715	A0A1S3T7U0	A0A1S3TTU0	60S ribosomal protein L7-2 isoform X1.	60S ribosomal protein L32-1.	0.953

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