(12 nodes) Mixed, incl. IstB-like ATP-binding protein, and Primosome complex network (Octadecabacter antarcticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGI65869.1	Hypothetical protein. (71 aa)
	AGI65870.1	IS21-family transposase. (499 aa)
	AGI65871.1	Putative IS21-family mobile element-associated ATP-binding protein. (250 aa)
	AGI67542.1	Hypothetical protein. (486 aa)
	AGI68484.1	Putative IS21-family mobile element-associated ATP-binding protein. (250 aa)
	AGI68485.1	IS21-family transposase. (499 aa)
	AGI68536.1	Putative ATP-binding protein. (270 aa)
	AGI68605.1	Putative IS21-family mobile element-associated ATP-binding protein. (250 aa)
	AGI68673.1	Hypothetical protein. (148 aa)
	AGI69116.1	Hypothetical protein. (126 aa)
	AGI70209.1	Putative IS21-family mobile element-associated ATP-binding protein. (250 aa)
	AGI70210.1	IS21-family transposase. (499 aa)

Your Current Organism:

Octadecabacter antarcticus

NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGI65869.1	AGI65870.1	OAN307_c00960	OAN307_c00970	Hypothetical protein.	IS21-family transposase.	0.610
AGI65869.1	AGI65871.1	OAN307_c00960	OAN307_c00980	Hypothetical protein.	Putative IS21-family mobile element-associated ATP-binding protein.	0.610
AGI65870.1	AGI65869.1	OAN307_c00970	OAN307_c00960	IS21-family transposase.	Hypothetical protein.	0.610
AGI65870.1	AGI65871.1	OAN307_c00970	OAN307_c00980	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.937
AGI65870.1	AGI68484.1	OAN307_c00970	OAN307_c29320	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.733
AGI65870.1	AGI68605.1	OAN307_c00970	OAN307_c30640	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.733
AGI65870.1	AGI68673.1	OAN307_c00970	OAN307_c31390	IS21-family transposase.	Hypothetical protein.	0.402
AGI65870.1	AGI69116.1	OAN307_c00970	OAN307_c36500	IS21-family transposase.	Hypothetical protein.	0.556
AGI65870.1	AGI70209.1	OAN307_c00970	OAN307_c48680	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.733
AGI65871.1	AGI65869.1	OAN307_c00980	OAN307_c00960	Putative IS21-family mobile element-associated ATP-binding protein.	Hypothetical protein.	0.610
AGI65871.1	AGI65870.1	OAN307_c00980	OAN307_c00970	Putative IS21-family mobile element-associated ATP-binding protein.	IS21-family transposase.	0.937
AGI65871.1	AGI68485.1	OAN307_c00980	OAN307_c29330	Putative IS21-family mobile element-associated ATP-binding protein.	IS21-family transposase.	0.733
AGI65871.1	AGI70210.1	OAN307_c00980	OAN307_c48690	Putative IS21-family mobile element-associated ATP-binding protein.	IS21-family transposase.	0.733
AGI68484.1	AGI65870.1	OAN307_c29320	OAN307_c00970	Putative IS21-family mobile element-associated ATP-binding protein.	IS21-family transposase.	0.733
AGI68484.1	AGI68485.1	OAN307_c29320	OAN307_c29330	Putative IS21-family mobile element-associated ATP-binding protein.	IS21-family transposase.	0.937
AGI68484.1	AGI70210.1	OAN307_c29320	OAN307_c48690	Putative IS21-family mobile element-associated ATP-binding protein.	IS21-family transposase.	0.733
AGI68485.1	AGI65871.1	OAN307_c29330	OAN307_c00980	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.733
AGI68485.1	AGI68484.1	OAN307_c29330	OAN307_c29320	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.937
AGI68485.1	AGI68605.1	OAN307_c29330	OAN307_c30640	IS21-family transposase.	Putative IS21-family mobile element-associated ATP-binding protein.	0.733
AGI68485.1	AGI68673.1	OAN307_c29330	OAN307_c31390	IS21-family transposase.	Hypothetical protein.	0.402

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