(40 nodes) Cell envelope network (Octadecabacter antarcticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	bamD	Outer membrane assembly lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (284 aa)
	thiB	Thiamine ABC transporter periplasmatic substrate-binding protein ThiB. (328 aa)
	AGI65975.1	Putative OmpA-like protein. (637 aa)
	AGI65993.1	OmpA-domain-containing protein. (733 aa)
	AGI66135.1	Putative MipA-family protein. (264 aa)
	AGI66249.1	Putative OmpA family protein. (310 aa)
	AGI66317.1	ABC transporter extracellular solute-binding protein. (644 aa)
	AGI66379.1	Putative inner membrane lipoprotein. (220 aa)
	AGI66532.1	Putative polysaccharide export protein. (558 aa)
	cpoB	Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (271 aa)
	AGI66689.1	Surface antigen-like protein. (593 aa)
	AGI66795.1	Peptide ABC transporter periplasmatic substrate-binding protein. (522 aa)
	AGI66948.1	Putative peptide ABC transporter periplasmatic substrate-binding protein. (573 aa)
	AGI67100.1	Hypothetical protein. (244 aa)
	AGI67161.1	Polysaccharide export protein. (335 aa)
	AGI67494.1	Putative MipA-family protein. (261 aa)
	AGI67680.1	Peptide ABC transporter periplasmatic solute-binding protein. (526 aa)
	AGI67791.1	Putative quinoprotein. (462 aa)
	ccmG	Thiol:disulfide interchange protein dsbE-like protein. (177 aa)
	AGI67954.1	Extracellular solute-binding protein. (546 aa)
	AGI67976.1	Transglycosylase-like protein. (214 aa)
	AGI67980.1	ABC transporter extracellular solute-binding protein. (555 aa)
	bamA	Outer membrane assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (779 aa)
	AGI68032.1	Putative extracellular solute-binding protein. (611 aa)
	AGI68130.1	Hypothetical protein. (367 aa)
	AGI68286.1	Hypothetical protein; Transglycosylase SLT-like4. (155 aa)
	lptD	Putative organic solvent tolerance family protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (708 aa)
	AGI68297.1	SurA-like protein. (405 aa)
	flgI	Flagellar basal-body P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (375 aa)
	flgH	Flagellar basal-body L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (213 aa)
	AGI69028.1	Hypothetical protein; Containing outer membrane autotransporter domain. (1180 aa)
	gsiB	ABC transporter extracellular glutathione binding protein GsiB. (495 aa)
	AGI69280.1	Putative periplasmic molybdate-binding protein. (259 aa)
	AGI69311.1	Putative transglycosylase. (286 aa)
	AGI69396.1	Associated with outer membrane protein. (211 aa)
	bztA	Glutamate/glutamine/aspartate/asparagine-binding protein BztA. (338 aa)
	hmuR	Hemin receptor. (661 aa)
	AGI70012.1	Putative peptidylprolyl isomerase. (284 aa)
	AGI70020.1	Putative peptide ABC transporter periplasmatic substrate-binding protein. (516 aa)
	mepA	Penicillin-insensitive murein endopeptidase MepA. (311 aa)

Your Current Organism:

Octadecabacter antarcticus

NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGI65975.1	AGI69396.1	OAN307_c02080	OAN307_c39680	Putative OmpA-like protein.	Associated with outer membrane protein.	0.419
AGI65975.1	bamA	OAN307_c02080	OAN307_c23740	Putative OmpA-like protein.	Outer membrane assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.412
AGI65975.1	cpoB	OAN307_c02080	OAN307_c08930	Putative OmpA-like protein.	Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	0.459
AGI66249.1	bamA	OAN307_c05110	OAN307_c23740	Putative OmpA family protein.	Outer membrane assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.484
AGI66249.1	cpoB	OAN307_c05110	OAN307_c08930	Putative OmpA family protein.	Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.	0.498
AGI66317.1	AGI66795.1	OAN307_c05890	OAN307_c10900	ABC transporter extracellular solute-binding protein.	Peptide ABC transporter periplasmatic substrate-binding protein.	0.423
AGI66317.1	AGI66948.1	OAN307_c05890	OAN307_c12530	ABC transporter extracellular solute-binding protein.	Putative peptide ABC transporter periplasmatic substrate-binding protein.	0.423
AGI66317.1	AGI67680.1	OAN307_c05890	OAN307_c20410	ABC transporter extracellular solute-binding protein.	Peptide ABC transporter periplasmatic solute-binding protein.	0.423
AGI66317.1	AGI67954.1	OAN307_c05890	OAN307_c23330	ABC transporter extracellular solute-binding protein.	Extracellular solute-binding protein.	0.423
AGI66317.1	AGI67980.1	OAN307_c05890	OAN307_c23650	ABC transporter extracellular solute-binding protein.	ABC transporter extracellular solute-binding protein.	0.423
AGI66317.1	AGI68032.1	OAN307_c05890	OAN307_c24180	ABC transporter extracellular solute-binding protein.	Putative extracellular solute-binding protein.	0.497
AGI66317.1	AGI70020.1	OAN307_c05890	OAN307_c46710	ABC transporter extracellular solute-binding protein.	Putative peptide ABC transporter periplasmatic substrate-binding protein.	0.423
AGI66317.1	gsiB	OAN307_c05890	OAN307_c38280	ABC transporter extracellular solute-binding protein.	ABC transporter extracellular glutathione binding protein GsiB.	0.423
AGI66379.1	bamA	OAN307_c06520	OAN307_c23740	Putative inner membrane lipoprotein.	Outer membrane assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.461
AGI66532.1	AGI67161.1	OAN307_c08090	OAN307_c14860	Putative polysaccharide export protein.	Polysaccharide export protein.	0.972
AGI66795.1	AGI66317.1	OAN307_c10900	OAN307_c05890	Peptide ABC transporter periplasmatic substrate-binding protein.	ABC transporter extracellular solute-binding protein.	0.423
AGI66795.1	AGI67680.1	OAN307_c10900	OAN307_c20410	Peptide ABC transporter periplasmatic substrate-binding protein.	Peptide ABC transporter periplasmatic solute-binding protein.	0.400
AGI66795.1	AGI67954.1	OAN307_c10900	OAN307_c23330	Peptide ABC transporter periplasmatic substrate-binding protein.	Extracellular solute-binding protein.	0.400
AGI66795.1	AGI67980.1	OAN307_c10900	OAN307_c23650	Peptide ABC transporter periplasmatic substrate-binding protein.	ABC transporter extracellular solute-binding protein.	0.408
AGI66795.1	AGI68032.1	OAN307_c10900	OAN307_c24180	Peptide ABC transporter periplasmatic substrate-binding protein.	Putative extracellular solute-binding protein.	0.423

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