STRINGSTRING
AGI66777.1 AGI66777.1 AGI66778.1 AGI66778.1 sgaA sgaA AGI67229.1 AGI67229.1 phnW phnW AGI69607.1 AGI69607.1 AGI69767.1 AGI69767.1 AGI66168.1 AGI66168.1 AGI69410.1 AGI69410.1 AGI68942.1 AGI68942.1 arcB2 arcB2 AGI66776.1 AGI66776.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGI66777.1Hypothetical protein. (388 aa)
AGI66778.1Putative serine racemase. (316 aa)
sgaASerine--glyoxylate aminotransferase SgaA. (388 aa)
AGI67229.1Hypothetical protein. (377 aa)
phnW2-aminoethylphosphonate--pyruvate transaminase PhnW. (396 aa)
AGI69607.1Putative diaminopropionate ammonia-lyase. (347 aa)
AGI69767.1Threonine dehydratase. (403 aa)
AGI66168.1Serine/threonine dehydratase family protein. (307 aa)
AGI69410.1Putative serine/threonine dehydratase. (319 aa)
AGI68942.1Putative aminotransferase. (403 aa)
arcB2Ornithine cyclodeaminase ArcB. (351 aa)
AGI66776.1Putative ornithine cyclodeaminase/mu-crystallin family. (321 aa)
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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