STRINGSTRING
thi5 thi5 AGI67485.1 AGI67485.1 AGI67522.1 AGI67522.1 AGI68463.1 AGI68463.1 AGI69596.1 AGI69596.1 AGI69599.1 AGI69599.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thi5Putative thiamine biosynthesis protein Thi5. (315 aa)
AGI67485.1ABC transporter periplasmatic substrate-binding protein. (352 aa)
AGI67522.1Putative ABC transporter periplasmatic binding protein. (333 aa)
AGI68463.1ABC transporter periplasmatic substrate binding protein. (327 aa)
AGI69596.1Putative ABC transporter periplasmatic solute-binding protein. (327 aa)
AGI69599.1Aliphatic sulfonate ABC transporter permease protein. (333 aa)
Your Current Organism:
Octadecabacter antarcticus
NCBI taxonomy Id: 391626
Other names: O. antarcticus 307, Octadecabacter antarcticus 307, Octadecabacter antarcticus CIP 106731, Octadecabacter antarcticus str. 307, Octadecabacter antarcticus strain 307, unidentified alpha proteobacterium (clone 307), unidentified alpha proteobacterium clone 307
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