Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI66819.1 | AGI67975.1 | OAN307_c11170 | OAN307_c23600 | Putative single-stranded-DNA-specific exonuclease. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.618 |
| AGI66819.1 | dnaN | OAN307_c11170 | OAN307_c00020 | Putative single-stranded-DNA-specific exonuclease. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.696 |
| AGI66819.1 | ligA | OAN307_c11170 | OAN307_c23890 | Putative single-stranded-DNA-specific exonuclease. | DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.512 |
| AGI66819.1 | mutL | OAN307_c11170 | OAN307_c46060 | Putative single-stranded-DNA-specific exonuclease. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.669 |
| AGI66819.1 | mutS | OAN307_c11170 | OAN307_c47900 | Putative single-stranded-DNA-specific exonuclease. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.609 |
| AGI66819.1 | xseA | OAN307_c11170 | OAN307_c15220 | Putative single-stranded-DNA-specific exonuclease. | Exodeoxyribonuclease 7 large subunit XseA; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.536 |
| AGI66819.1 | xseB | OAN307_c11170 | OAN307_c45740 | Putative single-stranded-DNA-specific exonuclease. | Exodeoxyribonuclease 7 small subunit XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.509 |
| AGI67185.1 | AGI69034.1 | OAN307_c15110 | OAN307_c35580 | Putative ATP-dependent DNA ligase. | Hypothetical protein; Similar to DNA polymerase III delta subunit. | 0.859 |
| AGI67185.1 | dnaN | OAN307_c15110 | OAN307_c00020 | Putative ATP-dependent DNA ligase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.991 |
| AGI67185.1 | ligA | OAN307_c15110 | OAN307_c23890 | Putative ATP-dependent DNA ligase. | DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.937 |
| AGI67538.1 | AGI68292.1 | OAN307_c18860 | OAN307_c27150 | Putative exonuclease. | Putative DNA polymerase III chi subunit. | 0.928 |
| AGI67538.1 | AGI69034.1 | OAN307_c18860 | OAN307_c35580 | Putative exonuclease. | Hypothetical protein; Similar to DNA polymerase III delta subunit. | 0.921 |
| AGI67538.1 | AGI70081.1 | OAN307_c18860 | OAN307_c47350 | Putative exonuclease. | Hypothetical protein. | 0.941 |
| AGI67538.1 | dnaE1 | OAN307_c18860 | OAN307_c37840 | Putative exonuclease. | DNA polymerase III subunit alpha. | 0.968 |
| AGI67538.1 | dnaN | OAN307_c18860 | OAN307_c00020 | Putative exonuclease. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.975 |
| AGI67538.1 | dnaQ | OAN307_c18860 | OAN307_c48050 | Putative exonuclease. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.900 |
| AGI67538.1 | dnaX | OAN307_c18860 | OAN307_c05820 | Putative exonuclease. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.972 |
| AGI67975.1 | AGI66819.1 | OAN307_c23600 | OAN307_c11170 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Putative single-stranded-DNA-specific exonuclease. | 0.618 |
| AGI67975.1 | AGI68292.1 | OAN307_c23600 | OAN307_c27150 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Putative DNA polymerase III chi subunit. | 0.931 |
| AGI67975.1 | dnaE1 | OAN307_c23600 | OAN307_c37840 | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | DNA polymerase III subunit alpha. | 0.786 |
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