STRINGSTRING
Veis_3038 Veis_3038 Veis_3039 Veis_3039 Veis_3040 Veis_3040 Veis_3041 Veis_3041 Veis_3042 Veis_3042 Veis_3043 Veis_3043 Veis_3044 Veis_3044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Veis_3038ABC-type antimicrobial peptide transport system ATPase component-like protein; KEGG: rfr:Rfer_3186 ABC transporter related. (128 aa)
Veis_3039KEGG: sus:Acid_2311 hypothetical protein. (139 aa)
Veis_3040KEGG: mxa:MXAN_6405 hypothetical protein. (368 aa)
Veis_3041KEGG: cvi:CV3941 hypothetical protein. (317 aa)
Veis_3042Hypothetical protein. (80 aa)
Veis_3043PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH695 ABC transporter ATP-binding protein. (314 aa)
Veis_3044PFAM: ABC-2 type transporter; KEGG: bce:BC5354 ABC transporter permease protein. (269 aa)
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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