STRINGSTRING
Veis_3057 Veis_3057 Veis_0002 Veis_0002 gpsA gpsA Veis_0066 Veis_0066 dnaG dnaG Veis_0123 Veis_0123 Veis_0228 Veis_0228 Veis_0236 Veis_0236 uvrA uvrA Veis_0304 Veis_0304 Veis_0339 Veis_0339 Veis_0495 Veis_0495 dnaX dnaX Veis_0578 Veis_0578 Veis_0648 Veis_0648 Veis_0733 Veis_0733 Veis_0789 Veis_0789 Veis_0790 Veis_0790 Veis_0831 Veis_0831 Veis_0875 Veis_0875 Veis_0964 Veis_0964 Veis_1006 Veis_1006 Veis_1015 Veis_1015 Veis_1018 Veis_1018 leuD leuD leuC leuC Veis_1132 Veis_1132 carA carA ppk ppk Veis_1489 Veis_1489 Veis_1490 Veis_1490 Veis_1495 Veis_1495 Veis_1496 Veis_1496 Veis_1563 Veis_1563 Veis_1566 Veis_1566 Veis_1580 Veis_1580 Veis_1648 Veis_1648 trmB trmB guaC guaC ureB ureB Veis_1745 Veis_1745 Veis_1897 Veis_1897 Veis_1910 Veis_1910 Veis_1911 Veis_1911 Veis_1918 Veis_1918 Veis_1919 Veis_1919 Veis_1933 Veis_1933 Veis_1994 Veis_1994 Veis_2018 Veis_2018 Veis_2047 Veis_2047 Veis_2251 Veis_2251 rpoB rpoB rpoC rpoC rpoA rpoA recG recG uvrB uvrB hscB hscB Veis_2383 Veis_2383 Veis_2384 Veis_2384 Veis_2385 Veis_2385 Veis_2395 Veis_2395 Veis_2413 Veis_2413 Veis_2423 Veis_2423 Veis_2458 Veis_2458 Veis_2459 Veis_2459 Veis_2510 Veis_2510 Veis_2511 Veis_2511 Veis_2516 Veis_2516 Veis_2565 Veis_2565 Veis_2583 Veis_2583 eno eno Veis_2654 Veis_2654 Veis_2667 Veis_2667 Veis_2669 Veis_2669 Veis_2670 Veis_2670 Veis_2678 Veis_2678 Veis_2679 Veis_2679 uvrC uvrC sucD sucD Veis_2761 Veis_2761 Veis_2772 Veis_2772 Veis_2801 Veis_2801 Veis_2807 Veis_2807 Veis_2808 Veis_2808 Veis_2809 Veis_2809 Veis_2849 Veis_2849 eno-2 eno-2 Veis_2893 Veis_2893 Veis_2894 Veis_2894 Veis_2957 Veis_2957 Veis_2958 Veis_2958 Veis_2959 Veis_2959 Veis_2960 Veis_2960 Veis_2961 Veis_2961 Veis_2962 Veis_2962 Veis_3048 Veis_3048 Veis_3054 Veis_3054 Veis_3058 Veis_3058 Veis_3129 Veis_3129 xseB xseB Veis_3401 Veis_3401 Veis_3459 Veis_3459 Veis_3549 Veis_3549 Veis_3605 Veis_3605 Veis_3682 Veis_3682 Veis_3725 Veis_3725 Veis_3727 Veis_3727 Veis_3759 Veis_3759 Veis_3769 Veis_3769 Veis_3815 Veis_3815 Veis_3841 Veis_3841 Veis_3862 Veis_3862 Veis_3913 Veis_3913 Veis_3934 Veis_3934 Veis_3942 Veis_3942 Veis_3945 Veis_3945 Veis_3946 Veis_3946 Veis_3947 Veis_3947 gcvH gcvH gcvP gcvP Veis_3978 Veis_3978 Veis_3979 Veis_3979 Veis_3999 Veis_3999 ruvA ruvA ruvB ruvB Veis_4085 Veis_4085 Veis_4180 Veis_4180 Veis_4181 Veis_4181 Veis_4183 Veis_4183 Veis_4185 Veis_4185 Veis_4198 Veis_4198 Veis_4212 Veis_4212 rpoZ rpoZ Veis_4244 Veis_4244 Veis_4313 Veis_4313 Veis_4331 Veis_4331 Veis_4332 Veis_4332 Veis_4354 Veis_4354 mfd mfd clpX clpX Veis_4509 Veis_4509 Veis_4550 Veis_4550 hslV hslV hslU hslU Veis_4578 Veis_4578 Veis_4604 Veis_4604 Veis_4605 Veis_4605 leuC-2 leuC-2 leuD-2 leuD-2 Veis_4760 Veis_4760 cobQ cobQ ribH ribH Veis_4801 Veis_4801 accD accD xseA xseA Veis_4921 Veis_4921 accA accA Veis_5007 Veis_5007 Veis_5014 Veis_5014
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Veis_3057Fumarase alpha subunit; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: rha:RHA1_ro08824 fumarate hydratase, class I. (290 aa)
Veis_0002DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (372 aa)
gpsAPFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rfr:Rfer_1313 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (336 aa)
Veis_0066PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: bur:Bcep18194_A4566 acetolactate synthase. (627 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (653 aa)
Veis_0123PFAM: Excinuclease ABC, C subunit domain protein; KEGG: aba:Acid345_1092 hypothetical protein. (296 aa)
Veis_0228PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpa:RPA1411 possible enoyl-CoA hydratase/isomerase. (279 aa)
Veis_0236PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ttj:TTHA0290 probable enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1012 aa)
Veis_0304KEGG: rfr:Rfer_3814 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (2005 aa)
Veis_0339PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: bur:Bcep18194_C6721 acetolactate synthase, large subunit. (576 aa)
Veis_0495PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_0591 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (284 aa)
dnaXDNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (614 aa)
Veis_0578RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (526 aa)
Veis_0648PFAM: UvrD/REP helicase; KEGG: pol:Bpro_2265 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1140 aa)
Veis_0733KEGG: pol:Bpro_1629 benzoyl-CoA oxygenase component B. (475 aa)
Veis_0789Acetolactate synthase, large subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rfr:Rfer_0882 thiamine pyrophosphate enzyme-like TPP-binding; Belongs to the TPP enzyme family. (564 aa)
Veis_0790Acetolactate synthase, large subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: reh:H16_B0313 acetolactate synthase large subunit (TPP dependent). (564 aa)
Veis_0831Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: reu:Reut_B3891 propionyl-CoA carboxylase. (514 aa)
Veis_0875PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: fal:FRAAL4655 hypothetical protein; putative glutathione synthetase ATP-binding domain. (420 aa)
Veis_0964TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: pol:Bpro_4600 DNA polymerase III, delta subunit. (351 aa)
Veis_1006KEGG: rfr:Rfer_2256 DNA-directed DNA polymerase. (351 aa)
Veis_1015PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit. (575 aa)
Veis_1018PFAM: type III restriction enzyme, res subunit; EcoEI R, C-terminal domain protein; SMART: DEAD-like helicases-like; KEGG: noc:Noc_3028 type I restriction enzyme, R subunit. (769 aa)
leuD3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (216 aa)
leuC3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (502 aa)
Veis_1132PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_5361 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)
carATIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: rfr:Rfer_2004 carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. (387 aa)
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (717 aa)
Veis_1489Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (150 aa)
Veis_1490acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
Veis_1495Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (399 aa)
Veis_1496Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (968 aa)
Veis_1563PFAM: NAD/NADP octopine/nopaline dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rde:RD1_0281 dehydrogenase, putative. (360 aa)
Veis_1566PFAM: restriction modification system DNA specificity domain; KEGG: mfa:Mfla_1176 restriction modification system DNA specificity domain. (403 aa)
Veis_1580Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_C0830 citrate lyase; Belongs to the HpcH/HpaI aldolase family. (303 aa)
Veis_1648KEGG: bxe:Bxe_B1374 hypothetical protein. (125 aa)
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (274 aa)
guaCGuanosine monophosphate reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily. (322 aa)
ureBKEGG: bte:BTH_I1497 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; Belongs to the urease beta subunit family. (101 aa)
Veis_1745TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: pol:Bpro_2317 acetolactate synthase, large subunit, biosynthetic type. (593 aa)
Veis_1897Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bpm:BURPS1710b_A1149 acetyl-CoA carboxylase carboxyltransferase. (538 aa)
Veis_1910KEGG: bbr:BB4085 putative 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; PFAM: aconitate hydratase domain protein. (428 aa)
Veis_1911TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: bbr:BB4086 putative 3-isopropylmalate dehydratase small subunit; Belongs to the LeuD family. (172 aa)
Veis_1918Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (443 aa)
Veis_19192-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (902 aa)
Veis_1933PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rme:Rmet_3896 thiamine pyrophosphate enzyme-like TPP-binding. (513 aa)
Veis_1994PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bur:Bcep18194_C7072 aromatic-ring-hydroxylating dioxygenase, beta subunit. (180 aa)
Veis_2018PFAM: FAD dependent oxidoreductase; KEGG: fal:FRAAL1569 glycerol-3-phosphate oxidase. (581 aa)
Veis_2047KEGG: pol:Bpro_1459 dihydroxyacetone kinase, subunit L; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak kinase; Dak phosphatase. (612 aa)
Veis_2251KEGG: nfa:nfa29860 putative enoyl-CoA hydratase/isomerase family protein. (141 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1370 aa)
rpoCDNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1411 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (330 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (750 aa)
uvrBExcinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (719 aa)
hscBCo-chaperone Hsc20; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. (178 aa)
Veis_2383TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_A0964 NAD-dependent formate dehydrogenase, alpha subunit. (959 aa)
Veis_2384PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: reh:H16_A0641 NAD-dependent formate dehydrogenase beta subunit. (518 aa)
Veis_2385PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: rme:Rmet_0553 NADH dehydrogenase (ubiquinone), 24 kDa subunit. (156 aa)
Veis_2395PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rfr:Rfer_2933 glutamate synthase (ferredoxin). (1586 aa)
Veis_2413Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: reu:Reut_B4463 propionyl-CoA carboxylase. (537 aa)
Veis_2423PFAM: restriction modification system DNA specificity domain; KEGG: hpj:jhp0726 putative type I restriction enzyme (specificity subunit). (426 aa)
Veis_2458KEGG: rha:RHA1_ro08466 glycine dehydrogenase (decarboxylating) subunit 2. (531 aa)
Veis_2459Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (463 aa)
Veis_2510PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: rsp:RSP_3145 putative tartrate dehydratase beta subunit. (219 aa)
Veis_2511Fumarase alpha subunit; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: jan:Jann_3970 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha protein. (312 aa)
Veis_2516KEGG: rsp:RSP_3155 thiamine pyrophosphate-requiring enzyme. (56 aa)
Veis_2565PFAM: Ankyrin; KEGG: cch:Cag_1796 ankyrin. (973 aa)
Veis_2583PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB2261 probable enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (428 aa)
Veis_2654Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (407 aa)
Veis_2667TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rfr:Rfer_1916 molybdopterin converting factor, subunit 1. (83 aa)
Veis_2669PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: sil:SPOA0131 aromatic 1,2-dioxygenase, beta subunit. (154 aa)
Veis_2670PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: sil:SPOA0131 aromatic 1,2-dioxygenase, beta subunit. (119 aa)
Veis_2678PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: sil:SPO1450 aromatic 1,2-dioxygenase, beta subunit. (165 aa)
Veis_2679Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: bja:blr3400 putative oxidoreductase. (437 aa)
uvrCExcinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (685 aa)
sucDsuccinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (298 aa)
Veis_2761PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hne:HNE_3375 enoyl-CoA hydratase/isomerase family protein. (261 aa)
Veis_2772PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit. (254 aa)
Veis_2801KEGG: pol:Bpro_3244 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (491 aa)
Veis_2807NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (719 aa)
Veis_2808NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (452 aa)
Veis_2809TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: rfr:Rfer_1497 NADH-quinone oxidoreductase, E subunit. (165 aa)
Veis_2849Hypothetical protein. (87 aa)
eno-2Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (443 aa)
Veis_2893PFAM: malonate decarboxylase gamma subunit; KEGG: xcb:XC_0575 malonate decarboxylase gamma subunit. (226 aa)
Veis_2894KEGG: xcb:XC_0574 acetyl-CoA carboxylase beta subunit. (297 aa)
Veis_2957KEGG: bps:BPSL2857 putative phosphonate metabolism PhnG protein. (163 aa)
Veis_2958PFAM: phosphonate metabolism; KEGG: rpa:RPA0694 putative PhnH protein, phosphonate metabolism, function unknown. (235 aa)
Veis_2959PFAM: phosphonate metabolism; KEGG: rfr:Rfer_0143 phosphonate metabolism. (368 aa)
Veis_2960Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (326 aa)
Veis_2961Phosphonate C-P lyase system protein PhnK; KEGG: ret:RHE_CH00163 probable phosphonate ABC transporter, ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)
Veis_2962KEGG: cvi:CV1841 phosphonates transport ATP-binding protein phnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase. (241 aa)
Veis_3048Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: fnu:FN1379 citrate lyase beta chain / citryl-CoA lyase subunit; Belongs to the HpcH/HpaI aldolase family. (288 aa)
Veis_3054PFAM: HpcH/HpaI aldolase; KEGG: syg:sync_0175 hypothetical protein. (268 aa)
Veis_3058KEGG: pai:PAE2131 fumarate hydratase class I beta subunit. (205 aa)
Veis_3129PFAM: restriction modification system DNA specificity domain; KEGG: cte:CT0679 type I restriction system specificity protein. (416 aa)
xseBExodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (77 aa)
Veis_3401PFAM: carboxyl transferase; KEGG: rfr:Rfer_2803 propionyl-CoA carboxylase. (510 aa)
Veis_3459Hypothetical protein; KEGG: ret:RHE_CH02656 beta-D-galactosidase protein. (174 aa)
Veis_3549PFAM: restriction modification system DNA specificity domain; KEGG: sas:SAS0395 putative restriction and modification system specificity protein. (296 aa)
Veis_3605PFAM: iron permease FTR1; KEGG: bxe:Bxe_A3150 oxidase-dependent Fe2+ transporter, (OFeT)family, FTR1-like. (276 aa)
Veis_3682PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: eba:p1B53 ATP-dependent DNA helicase. (629 aa)
Veis_3725KEGG: ilo:IL0002 DNA polymerase sliding clamp subunit. (366 aa)
Veis_3727PFAM: Phage P4 alpha, zinc-binding domain protein; KEGG: dar:Daro_2694 hypothetical protein. (361 aa)
Veis_3759KEGG: rme:Rmet_6048 superfamily I DNA and RNA helicases-like protein. (500 aa)
Veis_3769Hypothetical protein; KEGG: bam:Bamb_6611 relaxase/mobilization nuclease family protein. (221 aa)
Veis_3815PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_2419 short-chain dehydrogenase/reductase SDR. (266 aa)
Veis_3841PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpa:RPA0416 enoyl-CoA hydratase. (270 aa)
Veis_3862PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B0915 enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (186 aa)
Veis_3913PFAM: 20S proteasome, A and B subunits; KEGG: rfr:Rfer_1831 hypothetical protein. (276 aa)
Veis_3934Cytochrome b/b6, N-terminal domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (470 aa)
Veis_3942PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dar:Daro_0371 phenylacetate degradation probable enoyl-CoA hydratase PaaB; Belongs to the enoyl-CoA hydratase/isomerase family. (277 aa)
Veis_3945TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: reu:Reut_A3206 phenylacetate-CoA oxygenase, PaaG subunit. (336 aa)
Veis_3946TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: rso:RSp0605 probable phenylacetic acid degradation protein. (140 aa)
Veis_3947TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: eba:ebA3550 putative ring-hydroxylation complex protein 2. (258 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (124 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (970 aa)
Veis_39782-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (475 aa)
Veis_3979KEGG: pol:Bpro_2624 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; Transketolase, central region. (959 aa)
Veis_3999PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rha:RHA1_ro03582 sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family. (605 aa)
ruvAHolliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (191 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (354 aa)
Veis_4085KEGG: rfr:Rfer_3864 hypothetical protein. (784 aa)
Veis_4180KEGG: eca:ECA3852 DNA polymerase II. (270 aa)
Veis_4181DNA polymerase II; KEGG: pau:PA14_40120 DNA polymerase II. (211 aa)
Veis_4183Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: reh:H16_A2144 propionyl-CoA carboxylase beta chain. (553 aa)
Veis_4185PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB4711 probable enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)
Veis_4198PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Oxidoreductase FAD-binding domain protein; KEGG: bur:Bcep18194_C6878 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1155 aa)
Veis_4212PFAM: thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rxy:Rxyl_2271 thiamine pyrophosphate enzyme-like TPP binding region. (477 aa)
rpoZDNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (67 aa)
Veis_4244Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: pol:Bpro_4160 propionyl-CoA carboxylase. (535 aa)
Veis_4313TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rfr:Rfer_2465 thiamine biosynthesis protein ThiS. (69 aa)
Veis_4331KEGG: rfr:Rfer_2460 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding. (465 aa)
Veis_4332PFAM: phosphoadenosine phosphosulfate reductase; KEGG: rfr:Rfer_2459 sulfate adenylyltransferase. (320 aa)
Veis_4354PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: pol:Bpro_3600 succinate dehydrogenase, cytochrome b subunit. (144 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1174 aa)
clpXATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (447 aa)
Veis_4509PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: hma:rrnB0209 acetolactate synthase large subunit. (560 aa)
Veis_4550KEGG: aba:Acid345_0655 hypothetical protein. (952 aa)
hslVHslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (179 aa)
hslUHeat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (441 aa)
Veis_4578Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (81 aa)
Veis_4604PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rha:RHA1_ro10198 aromatic ring dioxygenase beta subunit. (158 aa)
Veis_4605Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B2752 putative terephthalate 1,2-dioxygenase, large subunit (TphA1). (439 aa)
leuC-23-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (468 aa)
leuD-23-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa)
Veis_4760KEGG: rfr:Rfer_2170 hypothetical protein. (447 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (628 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (154 aa)
Veis_4801PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_0580 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (289 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (290 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (444 aa)
Veis_4921PFAM: DNA polymerase III chi subunit, HolC; KEGG: pol:Bpro_2409 DNA polymerase III chi subunit, HolC. (144 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (325 aa)
Veis_5007Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (813 aa)
Veis_5014Conserved hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (127 aa)
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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