STRINGSTRING
Veis_3394 Veis_3394 Veis_2542 Veis_2542 Veis_3181 Veis_3181 Veis_2530 Veis_2530 Veis_0533 Veis_0533
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Veis_3394PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_0704 protein of unknown function DUF214. (421 aa)
Veis_2542PFAM: protein of unknown function DUF214; KEGG: ecs:ECs1294 hypothetical membrane protein. (441 aa)
Veis_3181TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rfr:Rfer_3232 lipoprotein releasing system, transmembrane protein, LolC/E family. (420 aa)
Veis_2530PFAM: protein of unknown function DUF214; KEGG: bch:Bcen2424_6004 protein of unknown function DUF214. (407 aa)
Veis_0533PFAM: protein of unknown function DUF214; KEGG: rfr:Rfer_3255 protein of unknown function DUF214. (840 aa)
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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